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SRR1747022_scaffold_36_prodigal-single.1__X__X__00181
Bact-VirSRR1747022_scaffold_36_prodigal-single.1__X__X__00181
Identity
- Kingdom:
- phage
Quality
55.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 218-351
Domain cluster:
rep: OQ791408.1__WID10864.1__phiG2_21__00021__D3-153
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01832.26 best | Glucosaminidase | 34.6 | 3.90e-08 | 80.6% | 96.8% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qdnA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.84 | 70.0 | 7.47e-01 | 87.3% | 98.3% |
| 3fi7A01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.83 | 72.0 | 7.36e-01 | 91.0% | 96.2% |
| 2zycA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.81 | 59.0 | 6.61e-01 | 90.3% | 95.3% |
| 4kt3A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.74 | 64.0 | 6.36e-01 | 92.5% | 95.0% |
| 153lA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.72 | 62.0 | 5.48e-01 | 90.3% | 77.3% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.70 | 58.0 | 5.20e-01 | 87.3% | 94.5% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.68 | 57.0 | 5.08e-01 | 88.1% | 97.8% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.67 | 59.0 | 5.35e-01 | 92.5% | 91.9% |
| 1ltmA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.62 | 53.0 | 4.87e-01 | 91.8% | 88.4% |
| 1k87A02 | 1.10.2060.10 | Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 | 0.56 | 31.0 | 3.36e-01 | 88.1% | 62.4% |
| 3da1A03 | 1.10.8.870 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Alpha-glycerophosphate oxidase, cap domain | 0.51 | 34.0 | 3.42e-01 | 79.9% | 65.4% |
| 7powA01 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.50 | 34.0 | 3.00e-01 | 80.6% | 45.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3590542 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.87 | 78.0 | 7.30e-01 | 94.0% | 96.9% |
| 3285050 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.85 | 74.0 | 6.74e-01 | 89.6% | 96.4% |
| 1406787 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.84 | 70.0 | 7.47e-01 | 87.3% | 98.3% |
| 4520768 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.84 | 78.0 | 7.13e-01 | 97.8% | 93.5% |
| 4007762 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.83 | 72.0 | 6.55e-01 | 90.3% | 86.7% |
| 4680920 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.83 | 71.0 | 6.80e-01 | 89.6% | 96.7% |
| 3508049 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.83 | 71.0 | 6.75e-01 | 89.6% | 92.3% |
| 1086527 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.74 | 64.0 | 6.36e-01 | 92.5% | 95.0% |
| 3281310 | 235.1.1.19 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT_2 | 0.71 | 60.0 | 5.14e-01 | 89.6% | 82.4% |
| 4134825 | 235.1.1.31 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › PF31087 | 0.71 | 62.0 | 5.44e-01 | 93.3% | 79.5% |
| 3966371 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.71 | 59.0 | 4.53e-01 | 89.6% | 79.7% |
| 3884688 | 235.1.1.31 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › PF31087 | 0.70 | 60.0 | 5.46e-01 | 90.3% | 80.6% |
| 3881182 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.55 | 38.0 | 4.00e-01 | 96.3% | 78.3% |
| 3668316 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.52 | 45.0 | 4.27e-01 | 92.5% | 89.4% |
| 3971001 | 3226.1.1.2 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Sulfate_transp | 0.51 | 45.0 | 3.24e-01 | 98.5% | 80.2% |