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SRR1747022_scaffold_43_prodigal-single.1__X__X__00021
Bact-VirSRR1747022_scaffold_43_prodigal-single.1__X__X__00021
Identity
- Kingdom:
- phage
Quality
84.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 74-151
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07486.18 best | Hydrolase_2 | 36.8 | 8.10e-09 | 79.5% | 54.8% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f55A01 | 1.10.10.2520 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Cell wall hydrolase SleB, domain 1 | 0.90 | 86.0 | 8.53e-01 | 100.0% | 97.5% |
| 3keaA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.66 | 46.0 | 3.18e-01 | 87.2% | 20.5% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.64 | 48.0 | 4.78e-01 | 79.5% | 91.1% |
| 2gf2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 45.0 | 3.79e-01 | 80.8% | 90.3% |
| 2h56A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.58 | 46.0 | 4.13e-01 | 89.7% | 96.5% |
| 1xd4A04 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.58 | 46.0 | 3.41e-01 | 89.7% | 44.5% |
| 3onkA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 42.0 | 3.59e-01 | 89.7% | 46.0% |
| 4a64C03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.57 | 45.0 | 4.22e-01 | 88.5% | 85.0% |
| 1evyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 43.0 | 3.62e-01 | 85.9% | 84.2% |
| 6hxpA01 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.55 | 39.0 | 3.61e-01 | 73.1% | 96.0% |
| 2qdjA03 | 1.10.472.140 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.55 | 45.0 | 3.97e-01 | 91.0% | 99.1% |
| 2xq0A03 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.53 | 39.0 | 3.19e-01 | 79.5% | 54.1% |
| 3qxlA00 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.53 | 42.0 | 3.07e-01 | 91.0% | 77.1% |
| 3vwaA03 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 42.0 | 2.86e-01 | 88.5% | 24.5% |
| 4rv1F00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 41.0 | 2.63e-01 | 88.5% | 23.8% |
| 4ap2B01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.51 | 40.0 | 3.45e-01 | 88.5% | 65.7% |
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.50 | 35.0 | 2.98e-01 | 74.4% | 63.4% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185732 | 3374.1.1.2 ↗ | a+b complex topology › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › Hydrolase_2 | 0.90 | 86.0 | 7.04e-01 | 100.0% | 60.9% |
| 3827279 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 45.0 | 2.58e-01 | 85.9% | 6.9% |
| 3760807 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.62 | 47.0 | 2.94e-01 | 82.1% | 42.5% |
| 3851507 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.61 | 47.0 | 3.67e-01 | 83.3% | 70.5% |
| 3759448 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 46.0 | 3.15e-01 | 88.5% | 22.1% |
| 3858847 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 2.92e-01 | 87.2% | 14.2% |
| 3935746 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.59 | 47.0 | 4.62e-01 | 88.5% | 80.0% |
| 4172495 | 1175.1.1.1 ↗ | alpha complex topology › Apolipoprotein N-acyltransferase transmembrane domain › Apolipoprotein N-acyltransferase transmembrane domain › Apolipoprotein N-acyltransferase transmembrane domain › LNT_N | 0.59 | 47.0 | 3.41e-01 | 88.5% | 68.1% |
| 3513297 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.59 | 43.0 | 4.02e-01 | 88.5% | 61.0% |
| 4262239 | 109.4.1.1386 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ints3_N, HEAT_Ints3_C | 0.58 | 46.0 | 2.66e-01 | 89.7% | 8.7% |
| 2775146 | 184.1.1.0 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N | 0.57 | 46.0 | 4.48e-01 | 88.5% | 80.7% |
| 4024220 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 39.0 | 3.81e-01 | 71.8% | 71.8% |
| 3742273 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.56 | 43.0 | 2.76e-01 | 87.2% | 39.8% |
| 3983080 | 5065.1.1.1 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 | 0.56 | 48.0 | 3.34e-01 | 100.0% | 56.5% |
| 3622287 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.55 | 42.0 | 2.70e-01 | 93.6% | 15.4% |
| 3492161 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.55 | 42.0 | 2.61e-01 | 88.5% | 13.2% |
| 3787748 | 109.6.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF | 0.55 | 42.0 | 2.87e-01 | 82.1% | 82.7% |
| 3472555 | 109.6.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF | 0.55 | 42.0 | 2.95e-01 | 89.7% | 24.1% |
| 4508282 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.55 | 43.0 | 3.42e-01 | 85.9% | 68.1% |
| 3689348 | 5048.1.1.1 ↗ | alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › MIP | 0.54 | 47.0 | 3.27e-01 | 98.7% | 60.8% |
| 3229065 | 109.4.1.669 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8,TTC7_N | 0.54 | 39.0 | 2.30e-01 | 87.2% | 8.5% |
| 4390907 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.54 | 42.0 | 3.43e-01 | 85.9% | 66.0% |
| 3736716 | 109.4.1.441 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TFCD_C | 0.53 | 42.0 | 3.38e-01 | 88.5% | 78.2% |
| 5058148 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.53 | 37.0 | 3.45e-01 | 73.1% | 59.0% |
| 4939444 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.53 | 40.0 | 3.39e-01 | 82.1% | 54.8% |
| 3991478 | 109.6.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF | 0.53 | 43.0 | 3.10e-01 | 91.0% | 75.9% |
| 4682562 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.53 | 39.0 | 3.09e-01 | 82.1% | 79.5% |
| 4364892 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.53 | 39.0 | 2.77e-01 | 82.1% | 52.5% |
| 4117754 | 109.4.1.144 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ints3_N | 0.52 | 38.0 | 2.67e-01 | 82.1% | 22.6% |
| 3373235 | 109.4.1.1266 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, ARM_PUB | 0.52 | 41.0 | 2.70e-01 | 88.5% | 25.9% |
| 4974334 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.52 | 39.0 | 3.43e-01 | 82.1% | 55.8% |
| 3236464 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.52 | 38.0 | 3.25e-01 | 79.5% | 60.7% |
| 1423661 | 109.4.1.3581 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, Arm_2, HEAT_2, ARM_PUB, PF28415 | 0.52 | 41.0 | 2.63e-01 | 88.5% | 23.8% |
| 3732989 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.52 | 45.0 | 2.83e-01 | 100.0% | 48.1% |
| 3927218 | 2485.1.1.67 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT | 0.51 | 44.0 | 3.31e-01 | 100.0% | 42.9% |
| 5031311 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.51 | 32.0 | 3.58e-01 | 100.0% | 83.3% |
| 3656993 | 109.4.1.120 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Kinetochor_Ybp2 | 0.51 | 41.0 | 2.82e-01 | 88.5% | 27.1% |