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SRR1747022_scaffold_43_prodigal-single.1__X__X__00027

Bact-Vir

SRR1747022_scaffold_43_prodigal-single.1__X__X__00027

Identity

Kingdom:
phage

Quality

85.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-51
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 54.0 4.59e-01 78.0% 45.1%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.75 63.0 4.64e-01 100.0% 36.4%
3f2eA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 54.0 4.33e-01 100.0% 41.0%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 51.0 4.44e-01 78.0% 47.1%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 51.0 4.75e-01 78.0% 60.4%
4cqbA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.70 55.0 3.26e-01 85.4% 84.1%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 46.0 4.50e-01 75.6% 63.8%
2ld5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 46.0 4.09e-01 78.0% 47.8%
1zq3P00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 48.0 4.21e-01 82.9% 82.4%
2ys9A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 45.0 3.93e-01 78.0% 42.9%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.64 50.0 4.11e-01 92.7% 65.9%
4ex8A00 3.40.1790.10 Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain 0.58 50.0 3.02e-01 100.0% 41.9%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3341094 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.74 56.0 4.82e-01 82.9% 86.2%
4275568 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 54.0 4.57e-01 78.0% 45.7%
3487287 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 53.0 4.63e-01 78.0% 49.2%
4282585 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 54.0 4.28e-01 78.0% 37.6%
3517002 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 52.0 4.67e-01 78.0% 53.3%
3484360 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 51.0 4.40e-01 78.0% 45.7%
3886591 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 50.0 4.16e-01 78.0% 40.0%
3996572 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 50.0 4.95e-01 78.0% 71.1%
3993019 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.68 49.0 4.42e-01 78.0% 55.0%
3229129 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.68 52.0 4.53e-01 82.9% 86.2%
3244955 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.68 49.0 4.31e-01 78.0% 49.2%
3578543 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.66 47.0 4.30e-01 78.0% 53.3%
3518339 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.66 55.0 5.41e-01 100.0% 93.3%
D2 medium residues 57-88
PDB
Domain cluster: representative