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SRR1747022_scaffold_43_prodigal-single.1__X__X__00040
Bact-VirSRR1747022_scaffold_43_prodigal-single.1__X__X__00040
Identity
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 146-220
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wzlA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 37.0 | 3.64e-01 | 70.7% | 50.6% |
| 3fvqA02 | 2.40.50.450 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 32.0 | 3.78e-01 | 88.0% | 100.0% |
| 1cczA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 35.0 | 3.35e-01 | 70.7% | 67.7% |
| 7lmaF01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 34.0 | 3.24e-01 | 72.0% | 56.3% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.50 | 36.0 | 3.63e-01 | 78.7% | 98.7% |
D2
medium
residues 1-18_35-131_221-243
Domain cluster:
rep: SRR1747065_scaffold_28_prodigal-single.1__X__X__00012__D1-101
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 23.0 | 3.42e-01 | 76.8% | 68.3% |
| 1g8lA04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.60 | 33.0 | 4.38e-01 | 80.4% | 100.0% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 27.0 | 3.41e-01 | 87.0% | 75.9% |
| 3fppA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 29.0 | 3.76e-01 | 82.6% | 100.0% |
| 4epcA02 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 21.0 | 2.70e-01 | 87.0% | 64.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024153 | 1.1.8.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › aSelB_III | 0.64 | 31.0 | 3.59e-01 | 83.3% | 63.0% |
| 4933166 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.58 | 33.0 | 4.28e-01 | 82.6% | 97.5% |
| 1176867 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.58 | 35.0 | 4.25e-01 | 85.5% | 92.3% |
| 3900611 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 22.0 | 3.03e-01 | 79.7% | 76.7% |
| 3600929 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 23.0 | 2.99e-01 | 76.1% | 69.4% |
| 3396896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 21.0 | 2.71e-01 | 87.0% | 60.0% |
| 3698757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 26.0 | 2.96e-01 | 87.7% | 64.0% |
D3
medium
residues 19-34_244-303