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SRR1747022_scaffold_43_prodigal-single.1__X__X__00090
Bact-VirSRR1747022_scaffold_43_prodigal-single.1__X__X__00090
Identity
- Kingdom:
- phage
Quality
66.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-76
Domain cluster:
rep: aot2015-SM02_SRR1761699_Peru_trim_clean_trim_clean_scaffold_10_curated_closed_complete_start-adj_prodigal-single.1__X__X__00241__D280-375
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 33.0 | 3.58e-01 | 100.0% | 64.5% |
| 3ppsA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 46.0 | 3.57e-01 | 94.7% | 86.9% |
| 3pe0A03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 35.0 | 3.71e-01 | 73.3% | 73.4% |
| 1bywA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 44.0 | 3.90e-01 | 88.0% | 66.4% |
| 3h9wA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 43.0 | 3.88e-01 | 88.0% | 65.1% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 42.0 | 3.69e-01 | 89.3% | 57.1% |
| 2yn0A00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.53 | 44.0 | 3.25e-01 | 100.0% | 70.6% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 32.0 | 3.53e-01 | 100.0% | 75.0% |
| 3lqcA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 43.0 | 3.54e-01 | 93.3% | 93.4% |
| 1z4vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 47.0 | 2.92e-01 | 100.0% | 47.5% |
| 1g5hA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 47.0 | 3.17e-01 | 100.0% | 70.2% |
| 7zhdA01 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.51 | 44.0 | 3.66e-01 | 100.0% | 92.3% |
| 3k4iA01 | 3.50.30.40 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Ribonuclease E inhibitor RraA/RraA-like | 0.50 | 45.0 | 3.52e-01 | 100.0% | 93.8% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3236050 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.61 | 44.0 | 3.88e-01 | 100.0% | 51.8% |
| 142250 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.60 | 39.0 | 4.12e-01 | 74.7% | 76.9% |
| 3393161 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.59 | 53.0 | 3.69e-01 | 100.0% | 70.6% |
| 3902139 | 4.1.1.99 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_10 | 0.59 | 40.0 | 4.14e-01 | 96.0% | 75.7% |
| 3212189 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.57 | 43.0 | 3.74e-01 | 100.0% | 53.0% |
| 4988654 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.55 | 44.0 | 4.06e-01 | 89.3% | 75.0% |
| 4121480 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.54 | 47.0 | 3.45e-01 | 100.0% | 82.3% |
| 3853596 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.54 | 39.0 | 3.27e-01 | 77.3% | 56.9% |
| 4415830 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.54 | 47.0 | 3.50e-01 | 100.0% | 80.0% |
| 4326473 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.53 | 47.0 | 3.40e-01 | 100.0% | 78.2% |
| 4968964 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.53 | 47.0 | 3.50e-01 | 100.0% | 81.5% |
| 5037379 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.53 | 47.0 | 3.49e-01 | 100.0% | 81.0% |
| 4440592 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.53 | 46.0 | 3.34e-01 | 100.0% | 79.1% |
| 4301468 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.53 | 46.0 | 3.40e-01 | 100.0% | 82.4% |
| 3645476 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.52 | 33.0 | 3.03e-01 | 90.7% | 47.0% |
| 3475493 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.52 | 41.0 | 2.54e-01 | 88.0% | 29.0% |
| 4945294 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.52 | 45.0 | 3.38e-01 | 100.0% | 83.1% |
| 3191106 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 41.0 | 3.13e-01 | 89.3% | 35.3% |
| 4127167 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.51 | 45.0 | 3.33e-01 | 100.0% | 82.4% |
| 4320728 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.51 | 44.0 | 3.27e-01 | 100.0% | 80.5% |
| 4940579 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.50 | 43.0 | 3.32e-01 | 100.0% | 86.2% |
| 4975302 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.50 | 43.0 | 3.25e-01 | 100.0% | 81.5% |
| 3672911 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.50 | 40.0 | 3.05e-01 | 100.0% | 34.5% |