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SRR1747022_scaffold_43_prodigal-single.1__X__X__00102
Bact-VirSRR1747022_scaffold_43_prodigal-single.1__X__X__00102
Identity
- Kingdom:
- phage
Quality
71.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-121
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qh5B00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 42.0 | 3.02e-01 | 86.4% | 53.1% |
| 4as2A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 38.0 | 2.86e-01 | 82.7% | 91.5% |
| 3jyuA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 37.0 | 3.67e-01 | 79.0% | 92.2% |
| 3bn6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 34.0 | 2.81e-01 | 70.4% | 82.9% |
| 1oeyA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 34.0 | 3.46e-01 | 71.6% | 89.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4645846 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.54 | 37.0 | 2.96e-01 | 71.6% | 53.5% |
| 4480064 | 241.12.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like › DUF1054 | 0.53 | 41.0 | 3.14e-01 | 86.4% | 42.0% |
| 4489784 | 241.12.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like › DUF1054 | 0.53 | 41.0 | 3.14e-01 | 86.4% | 41.0% |
| 4643750 | 241.12.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like › DUF1054 | 0.52 | 39.0 | 3.05e-01 | 82.7% | 43.0% |
| None | — | 0.52 | 44.0 | 3.33e-01 | 100.0% | 83.1% | |
| 3953172 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.51 | 44.0 | 3.39e-01 | 98.8% | 86.0% |
| 3421892 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 36.0 | 3.43e-01 | 75.3% | 88.0% |
| 5049587 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.51 | 41.0 | 2.94e-01 | 88.9% | 59.6% |
| 3593442 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 38.0 | 3.50e-01 | 79.0% | 73.3% |
| 4646072 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.50 | 34.0 | 2.80e-01 | 72.8% | 54.7% |