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SRR1747022_scaffold_43_prodigal-single.1__X__X__00239
Bact-VirSRR1747022_scaffold_43_prodigal-single.1__X__X__00239
Identity
- Kingdom:
- phage
Quality
67.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 229-286
D2
high
residues 297-363
D3
medium
residues 35-210
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00395.26 best | SLH | 34.3 | 2.60e-08 | 25.0% | 100.0% |
| PF00395.26 | SLH | 33.1 | 6.20e-08 | 19.3% | 72.7% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1eg3A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 30.0 | 4.13e-01 | 94.9% | 92.3% |
| 2vxzA02 | 1.10.10.1490 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 26.0 | 3.48e-01 | 79.5% | 85.1% |
| 1gq1A01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.54 | 26.0 | 3.33e-01 | 85.2% | 76.0% |
| 4jndA01 | 1.10.1740.220 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.52 | 25.0 | 2.90e-01 | 81.8% | 59.2% |
| 1d5tA03 | 1.10.405.10 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 | 0.50 | 26.0 | 3.11e-01 | 79.5% | 74.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4182872 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.93 | 88.0 | 8.91e-01 | 98.9% | 97.7% |
| 4525080 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.89 | 85.0 | 8.40e-01 | 100.0% | 96.8% |
| 4419547 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.87 | 71.0 | 6.58e-01 | 83.0% | 76.7% |
| 4378819 | 11.1.5.137 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › SLH | 0.87 | 70.0 | 6.20e-01 | 83.0% | 70.2% |
| 4480896 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.85 | 72.0 | 7.18e-01 | 87.5% | 93.9% |
| 2390863 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.82 | 76.0 | 7.72e-01 | 100.0% | 98.2% |
| 4392152 | 193.3.1.1 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains › SLH | 0.79 | 74.0 | 7.34e-01 | 99.4% | 95.0% |
| 3295271 | 193.3.1.0 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains | 0.71 | 59.0 | 6.37e-01 | 97.7% | 100.0% |
| 3322118 | 193.3.1.0 ↗ | alpha bundles › CH domain-like › Surface-layer homology (SLH) domains › Surface-layer homology (SLH) domains | 0.69 | 66.0 | 6.57e-01 | 100.0% | 98.9% |
| 4046483 | 6056.1.1.0 ↗ | alpha arrays › SP1917-like › SP1917-like › SP1917-like | 0.58 | 30.0 | 4.06e-01 | 94.9% | 93.7% |