SRR1747022_scaffold_43_prodigal-single.1XX__00240

Bact-Vir

SRR1747022_scaffold_43_prodigal-single.1__X__X__00240

Identity

77.6 mean pLDDT

View cluster (2 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-45

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4gx0A01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.75	63.0	4.66e-01	100.0%	36.9%
8ctsB01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.72	60.0	4.62e-01	97.5%	42.5%
6xasW01	3.90.940.10	Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega	0.59	50.0	4.78e-01	100.0%	91.8%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3188738	5076.1.1.1 ↗	alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr	0.75	66.0	3.89e-01	100.0%	13.3%
3373143	3226.1.1.1 ↗	alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease	0.72	61.0	3.44e-01	100.0%	57.4%
3254770	4967.1.1.0 ↗	alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases	0.61	47.0	3.54e-01	85.0%	48.6%
4078439	152.1.2.1 ↗	alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6	0.61	52.0	4.44e-01	97.5%	78.5%
2715292	152.1.2.1 ↗	alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6	0.60	53.0	4.61e-01	100.0%	73.8%