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SRR1747022_scaffold_43_prodigal-single.1__X__X__00327
Bact-VirSRR1747022_scaffold_43_prodigal-single.1__X__X__00327
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-84
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vwxZ00 | 2.30.30.770 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 54.0 | 4.59e-01 | 90.2% | 96.3% |
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 36.0 | 4.28e-01 | 75.6% | 95.9% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 36.0 | 4.27e-01 | 74.4% | 100.0% |
| 1mr1D00 | 3.10.390.10 | Alpha Beta › Roll › SAND domain › SAND domain-like | 0.58 | 42.0 | 4.00e-01 | 100.0% | 64.6% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 40.0 | 4.36e-01 | 76.8% | 86.8% |
| 3edgA00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.57 | 43.0 | 3.31e-01 | 82.9% | 99.0% |
| 2m9uA00 | 2.30.30.850 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 4.06e-01 | 82.9% | 91.0% |
| 3bfmA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 41.0 | 3.28e-01 | 92.7% | 67.6% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 35.0 | 3.65e-01 | 74.4% | 90.8% |
| 4gp0B02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 34.0 | 3.05e-01 | 72.0% | 99.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5034126 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.65 | 45.0 | 5.05e-01 | 82.9% | 98.3% |
| 4963432 | 4076.2.1.7 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF5817 | 0.64 | 47.0 | 4.67e-01 | 86.6% | 75.3% |
| 4119693 | 6064.1.1.0 ↗ | few secondary structure elements › EAGR box containing domain in MG200 › EAGR box containing domain in MG200 › EAGR box containing domain in MG200 | 0.62 | 35.0 | 4.21e-01 | 100.0% | 91.8% |
| 3404158 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.61 | 45.0 | 4.00e-01 | 78.0% | 56.5% |
| 4185726 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.60 | 30.0 | 3.79e-01 | 93.9% | 82.2% |
| 3590122 | 4999.1.1.1 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX | 0.54 | 40.0 | 4.44e-01 | 80.5% | 100.0% |
| 3594104 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 37.0 | 3.21e-01 | 73.2% | 100.0% |
| 3582655 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.52 | 38.0 | 3.74e-01 | 90.2% | 72.2% |
| 4871275 | 3081.1.1.1 ↗ | a+b complex topology › Envelope glycoprotein GP1 › Envelope glycoprotein GP1 › Envelope glycoprotein GP1 › Arena_glycoprot | 0.51 | 38.0 | 3.34e-01 | 80.5% | 90.2% |
| 3998955 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 39.0 | 3.55e-01 | 81.7% | 77.3% |