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SRR1747023_scaffold_5_prodigal-single.1__X__X__00049
Bact-VirSRR1747023_scaffold_5_prodigal-single.1__X__X__00049
Identity
- Kingdom:
- phage
Quality
75.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 93-230
Domain cluster:
representative
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09479.17 best | Flg_new | 25.8 | 1.40e-05 | 33.3% | 56.9% |
| PF09479.17 | Flg_new | 17.1 | 7.10e-03 | 29.0% | 47.7% |
| PF09479.17 | Flg_new | 14.0 | 6.70e-02 | 15.2% | 23.1% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ryjA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.61 | 31.0 | 4.04e-01 | 89.9% | 91.4% |
| 2kvzA00 | 3.10.20.320 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) | 0.61 | 32.0 | 4.01e-01 | 90.6% | 82.4% |
| 1wwtA01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.60 | 29.0 | 4.02e-01 | 72.5% | 100.0% |
| 3lyyA00 | 2.60.40.4300 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 39.0 | 4.53e-01 | 90.6% | 95.1% |
| 1wgdA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 36.0 | 4.17e-01 | 98.6% | 95.7% |
| 3rfzB04 | 2.60.40.2610 | Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein FimD, plug domain | 0.54 | 31.0 | 3.72e-01 | 71.7% | 84.6% |
| 6sjqA00 | 3.10.20.650 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 37.0 | 3.96e-01 | 93.5% | 83.5% |
| 1vjkA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.53 | 33.0 | 3.99e-01 | 71.0% | 96.6% |
| 2c7hA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 31.0 | 3.74e-01 | 92.8% | 97.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4291271 | 221.1.1.38 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new | 0.84 | 45.0 | 6.05e-01 | 73.2% | 97.3% |
| 5081736 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 30.0 | 4.08e-01 | 72.5% | 96.9% |
| 4992442 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.60 | 29.0 | 3.99e-01 | 71.7% | 95.4% |
| 3953162 | 221.1.1.84 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ub-Mut7C | 0.54 | 31.0 | 3.74e-01 | 72.5% | 88.2% |
| 2565083 | 221.1.1.62 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › BILBO1_N | 0.53 | 37.0 | 3.96e-01 | 93.5% | 83.5% |
| 3978781 | 11.1.4.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher | 0.53 | 32.0 | 3.87e-01 | 94.9% | 95.3% |
| 3508860 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.53 | 34.0 | 4.04e-01 | 74.6% | 97.8% |
D2
medium
residues 1-91
D3
medium
residues 235-309
Domain cluster:
rep: IMGVR_UViG_3300029589_000301-3300029589-Ga0245106_10093019__D698-763
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18998.7 best | Flg_new_2 | 27.2 | 4.50e-06 | 98.7% | 87.8% |
| PF09479.17 | Flg_new | 51.1 | 1.70e-13 | 94.7% | 100.0% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y5pA00 | 2.60.40.4270 | Mainly Beta › Sandwich › Immunoglobulin-like › Listeria-Bacteroides repeat domain | 0.87 | 76.0 | 7.73e-01 | 100.0% | 95.8% |
| 4jdzA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 60.0 | 5.28e-01 | 100.0% | 96.5% |
| 6bbtA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.68 | 61.0 | 5.22e-01 | 100.0% | 100.0% |
| 3i57A01 | 3.10.20.470 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.67 | 61.0 | 6.11e-01 | 100.0% | 100.0% |
| 4hssB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 60.0 | 5.01e-01 | 100.0% | 92.9% |
| 4m01A02 | 3.10.20.320 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) | 0.66 | 58.0 | 5.79e-01 | 97.3% | 100.0% |
| 4uzgA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 57.0 | 4.92e-01 | 100.0% | 94.2% |
| 2v5tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 51.0 | 4.78e-01 | 86.7% | 81.9% |
| 3ah7A00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.63 | 56.0 | 4.97e-01 | 100.0% | 95.4% |
| 1vjkA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.63 | 56.0 | 5.35e-01 | 100.0% | 100.0% |
| 2pmvA02 | 2.170.130.30 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › | 0.63 | 55.0 | 4.92e-01 | 100.0% | 98.1% |
| 3gf8A01 | 2.60.40.2100 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 55.0 | 4.34e-01 | 100.0% | 85.4% |
| 2xtlA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 54.0 | 4.70e-01 | 100.0% | 98.3% |
| 5mpoB00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.61 | 53.0 | 5.16e-01 | 98.7% | 96.4% |
| 2wv3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 4.34e-01 | 85.3% | 83.0% |
| 2fazA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 52.0 | 5.18e-01 | 100.0% | 98.7% |
| 2l52A00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.58 | 51.0 | 4.67e-01 | 100.0% | 94.9% |
| 5k6wA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 4.14e-01 | 85.3% | 84.0% |
| 2x41A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.46e-01 | 82.7% | 83.2% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4249879 | 221.1.1.38 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new | 0.88 | 77.0 | 7.94e-01 | 100.0% | 98.6% |
| 4291271 | 221.1.1.38 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new | 0.86 | 76.0 | 7.61e-01 | 100.0% | 93.3% |
| 4554776 | 221.1.1.38 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new | 0.81 | 74.0 | 7.13e-01 | 100.0% | 96.5% |
| 3111933 | 3114.1.1.1 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › MucBP | 0.76 | 62.0 | 6.22e-01 | 100.0% | 88.2% |
| 4989778 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.74 | 59.0 | 6.11e-01 | 100.0% | 91.4% |
| 3988635 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.74 | 62.0 | 6.45e-01 | 98.7% | 97.1% |
| 3587079 | 3114.1.1.1 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › MucBP | 0.72 | 57.0 | 6.07e-01 | 94.7% | 100.0% |
| 3587683 | 3114.1.1.0 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain | 0.71 | 59.0 | 5.79e-01 | 100.0% | 86.3% |
| 5031778 | 3114.1.1.6 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › Flg_new_2 | 0.71 | 61.0 | 6.13e-01 | 100.0% | 94.7% |
| 3882399 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 57.0 | 5.23e-01 | 100.0% | 69.0% |
| 1299250 | 3114.1.1.0 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain | 0.67 | 60.0 | 5.92e-01 | 100.0% | 98.8% |
| 4955385 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.67 | 60.0 | 5.79e-01 | 100.0% | 95.3% |
| 4471773 | 3114.1.1.1 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › MucBP | 0.66 | 58.0 | 5.81e-01 | 100.0% | 98.7% |
| 4956484 | 11.1.4.140 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Flg_new_2 | 0.65 | 57.0 | 5.42e-01 | 98.7% | 96.7% |
| 5055117 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.65 | 59.0 | 5.44e-01 | 100.0% | 98.9% |
| 4942978 | 11.1.4.140 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Flg_new_2 | 0.65 | 57.0 | 5.43e-01 | 98.7% | 98.9% |
| 4119228 | 11.1.4.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher | 0.65 | 57.0 | 5.62e-01 | 100.0% | 97.5% |
| 4954982 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.64 | 57.0 | 5.41e-01 | 98.7% | 97.7% |
| 4997730 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.64 | 57.0 | 5.41e-01 | 100.0% | 97.8% |
| 5075464 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 56.0 | 5.21e-01 | 98.7% | 98.9% |
| 3952316 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.64 | 56.0 | 5.54e-01 | 100.0% | 100.0% |
| 6203 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.63 | 56.0 | 5.35e-01 | 100.0% | 100.0% |
| 3309894 | 11.1.4.72 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_2nd | 0.63 | 55.0 | 5.10e-01 | 98.7% | 100.0% |
| 5068960 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.63 | 56.0 | 5.09e-01 | 100.0% | 98.0% |
| 5072079 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 53.0 | 5.08e-01 | 97.3% | 100.0% |
| 5018640 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.62 | 53.0 | 5.08e-01 | 97.3% | 100.0% |
| 4939183 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.62 | 54.0 | 5.30e-01 | 97.3% | 100.0% |
| 4219538 | 221.1.1.25 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › APG12 | 0.62 | 54.0 | 4.86e-01 | 98.7% | 81.0% |
| 5070573 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 53.0 | 5.09e-01 | 96.0% | 100.0% |
| 3713719 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 53.0 | 4.90e-01 | 96.0% | 80.0% |
| 3820585 | 11.1.4.72 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_2nd | 0.61 | 54.0 | 4.93e-01 | 100.0% | 97.0% |
| 3932712 | 221.1.1.68 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblA | 0.61 | 53.0 | 4.73e-01 | 98.7% | 83.6% |
| 4221319 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.61 | 53.0 | 5.06e-01 | 100.0% | 95.6% |
| 4959429 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.60 | 53.0 | 4.63e-01 | 100.0% | 76.5% |
| 4971755 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.60 | 53.0 | 4.98e-01 | 100.0% | 97.8% |
| 3821272 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.60 | 50.0 | 5.10e-01 | 94.7% | 100.0% |
| 4981481 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 47.0 | 4.48e-01 | 86.7% | 82.2% |
| 409389 | 11.1.1.870 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26918 | 0.60 | 46.0 | 4.33e-01 | 85.3% | 77.9% |
| 5025556 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.59 | 50.0 | 5.06e-01 | 96.0% | 100.0% |
| 4946900 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 46.0 | 4.17e-01 | 86.7% | 83.8% |
| 4993387 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.59 | 50.0 | 4.73e-01 | 96.0% | 100.0% |
| 5010386 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.58 | 52.0 | 5.09e-01 | 100.0% | 93.8% |
| 5011116 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.58 | 49.0 | 4.86e-01 | 97.3% | 100.0% |
| 5042815 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.55 | 45.0 | 4.45e-01 | 97.3% | 86.3% |