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SRR1747023_scaffold_5_prodigal-single.1__X__X__00080
Bact-VirSRR1747023_scaffold_5_prodigal-single.1__X__X__00080
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-156
Domain cluster:
rep: NODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00052__D3-211
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gwrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 25.0 | 2.77e-01 | 72.7% | 43.3% |
| 2rgqB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 27.0 | 2.96e-01 | 77.3% | 45.9% |
| 2daxA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.54 | 34.0 | 3.53e-01 | 91.6% | 66.7% |
| 3ek7A01 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.51 | 41.0 | 3.48e-01 | 83.8% | 92.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3243080 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.57 | 25.0 | 3.08e-01 | 79.2% | 63.0% |
| 5044200 | 289.1.1.0 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase | 0.51 | 36.0 | 3.53e-01 | 94.2% | 66.7% |