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SRR1747023_scaffold_5_prodigal-single.1__X__X__00132
Bact-VirSRR1747023_scaffold_5_prodigal-single.1__X__X__00132
Identity
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-134
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.63 | 41.0 | 4.05e-01 | 77.8% | 61.6% |
| 4wyqB00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 36.0 | 3.95e-01 | 76.7% | 72.0% |
| 3ddcB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 43.0 | 3.76e-01 | 75.6% | 74.4% |
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.55 | 38.0 | 3.04e-01 | 70.0% | 78.8% |
| 2jh1A01 | 3.90.640.70 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.55 | 38.0 | 3.61e-01 | 72.2% | 86.1% |
| 1bp1A01 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.55 | 38.0 | 3.09e-01 | 73.3% | 92.8% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.53 | 47.0 | 4.58e-01 | 100.0% | 91.2% |
| 4mb4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.98e-01 | 97.8% | 84.8% |
| 2f3xA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 37.0 | 3.22e-01 | 74.4% | 81.8% |
| 1xubA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 36.0 | 3.16e-01 | 73.3% | 64.9% |
| 1vjhA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 35.0 | 3.28e-01 | 94.4% | 54.2% |
| 4e72A01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.50 | 36.0 | 3.27e-01 | 75.6% | 65.3% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018171 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.71 | 43.0 | 4.67e-01 | 100.0% | 73.3% |
| 4108772 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.68 | 45.0 | 4.82e-01 | 85.6% | 81.3% |
| 3657532 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.67 | 47.0 | 3.14e-01 | 74.4% | 18.6% |
| 3588535 | 1098.1.1.1 ↗ | a+b three layers › Mid-cell-anchored protein Z (MapZ) extracellular domain 2 › Mid-cell-anchored protein Z (MapZ) extracellular domain 2 › Mid-cell-anchored protein Z (MapZ) extracellular domain 2 › MapZ_C2 | 0.61 | 53.0 | 4.85e-01 | 92.2% | 88.6% |
| 5014318 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 40.0 | 4.27e-01 | 100.0% | 78.7% |
| 4420091 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.60 | 50.0 | 3.77e-01 | 92.2% | 53.3% |
| 4540639 | 243.1.1.5 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Tim44 | 0.60 | 42.0 | 3.73e-01 | 73.3% | 71.5% |
| 4226880 | 223.1.1.69 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › VWA_N | 0.58 | 41.0 | 3.06e-01 | 74.4% | 90.4% |
| 4367047 | 304.156.1.1 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › FtsK_alpha | 0.58 | 40.0 | 3.75e-01 | 71.1% | 73.6% |
| 5022489 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 41.0 | 2.60e-01 | 73.3% | 24.2% |
| 5044559 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 37.0 | 3.93e-01 | 73.3% | 75.0% |
| 3788335 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.57 | 49.0 | 3.13e-01 | 93.3% | 22.0% |
| 3711065 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.57 | 40.0 | 3.75e-01 | 94.4% | 58.3% |
| 3552606 | 2008.7.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Protection of telomeres protein 1 (POT1) C-terminal insertion domain › Protection of telomeres protein 1 (POT1) C-terminal insertion domain › POT1_C_insert | 0.56 | 38.0 | 3.27e-01 | 91.1% | 42.0% |
| 3579945 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.56 | 48.0 | 4.07e-01 | 100.0% | 56.1% |
| 5044076 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.55 | 37.0 | 3.39e-01 | 95.6% | 52.5% |
| 3727633 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.54 | 43.0 | 2.74e-01 | 85.6% | 29.6% |
| 5041726 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 38.0 | 3.94e-01 | 100.0% | 78.8% |
| 3194095 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.54 | 35.0 | 3.49e-01 | 73.3% | 62.1% |
| 3610755 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 37.0 | 3.42e-01 | 76.7% | 55.7% |
| 4998603 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.52 | 34.0 | 3.63e-01 | 72.2% | 78.7% |
| 3413757 | 220.1.1.26 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II | 0.51 | 46.0 | 3.96e-01 | 100.0% | 71.4% |
| 3515197 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.51 | 35.0 | 2.92e-01 | 74.4% | 38.2% |
| 3904562 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.51 | 32.0 | 3.42e-01 | 96.7% | 72.5% |
| 3471446 | 7579.1.1.81 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Arb2 | 0.51 | 35.0 | 2.47e-01 | 72.2% | 34.4% |
| 3796020 | 220.1.1.26 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II | 0.50 | 44.0 | 3.88e-01 | 100.0% | 75.6% |
| 3455522 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.50 | 42.0 | 2.89e-01 | 95.6% | 88.7% |