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SRR1747023_scaffold_5_prodigal-single.1__X__X__00244

Bact-Vir

SRR1747023_scaffold_5_prodigal-single.1__X__X__00244

Identity

Kingdom:
phage

Quality

95.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-74
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13443.13 best HTH_26 34.7 2.30e-08 95.9% 95.2%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 67.0 6.71e-01 89.0% 100.0%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 62.0 5.90e-01 94.5% 69.8%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 61.0 6.19e-01 83.6% 84.5%
2xi8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 64.0 6.66e-01 93.2% 98.5%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 65.0 6.24e-01 93.2% 87.1%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 59.0 6.35e-01 87.7% 100.0%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 65.0 6.69e-01 93.2% 100.0%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 60.0 6.04e-01 84.9% 86.1%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 59.0 6.23e-01 89.0% 98.4%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 62.0 6.37e-01 91.8% 95.7%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 61.0 6.32e-01 89.0% 100.0%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 59.0 6.17e-01 89.0% 95.5%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 59.0 6.30e-01 86.3% 100.0%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 64.0 6.31e-01 94.5% 94.8%
3qf3D00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 60.0 5.04e-01 90.4% 59.4%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 64.0 6.00e-01 95.9% 85.6%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 61.0 6.31e-01 93.2% 97.1%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 61.0 6.37e-01 90.4% 98.5%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 61.0 6.17e-01 91.8% 98.6%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 64.0 6.41e-01 95.9% 95.9%
6b9sB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 58.0 5.85e-01 89.0% 87.7%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 63.0 5.84e-01 94.5% 89.0%
3g7dA04 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 62.0 5.78e-01 93.2% 74.7%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 59.0 6.16e-01 89.0% 98.5%
4jcyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 60.0 5.54e-01 90.4% 73.9%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 63.0 6.18e-01 97.3% 98.7%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 58.0 5.99e-01 93.2% 97.1%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 60.0 5.95e-01 94.5% 90.7%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 59.0 5.58e-01 93.2% 80.9%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 61.0 5.93e-01 98.6% 98.8%
1neqA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 48.0 4.86e-01 93.2% 90.5%
1ebdC00 4.10.320.10 Few Secondary Structures › Irregular › Dihydrolipoamide Transferase › E3-binding domain 0.60 30.0 3.87e-01 75.3% 85.4%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.58 35.0 3.76e-01 79.5% 69.8%
1x2mA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 34.0 3.83e-01 71.2% 77.8%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 46.0 4.59e-01 93.2% 88.2%
2f5zK00 4.10.320.10 Few Secondary Structures › Irregular › Dihydrolipoamide Transferase › E3-binding domain 0.58 31.0 3.86e-01 75.3% 88.4%
1dulA00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.57 43.0 4.41e-01 87.7% 85.3%
3lqhA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.54 43.0 3.96e-01 94.5% 90.6%
2fltA00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.53 42.0 3.66e-01 87.7% 85.5%
1iqzA00 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 43.0 4.23e-01 95.9% 91.4%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 42.0 3.76e-01 93.2% 80.8%
2ah5A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.50 40.0 4.13e-01 93.2% 100.0%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3988657 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.97 83.0 8.84e-01 93.2% 100.0%
431258 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.96 84.0 8.81e-01 95.9% 100.0%
4952242 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.82 66.0 6.74e-01 89.0% 90.0%
3957550 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 64.0 6.51e-01 86.3% 87.1%
5050903 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 67.0 6.72e-01 94.5% 88.0%
3947329 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 65.0 6.86e-01 90.4% 98.5%
4084920 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.80 69.0 7.10e-01 95.9% 98.6%
5003089 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 64.0 6.60e-01 89.0% 90.0%
3282671 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 65.0 6.57e-01 91.8% 87.7%
4034513 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 61.0 6.65e-01 84.9% 100.0%
3988959 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 64.0 6.71e-01 89.0% 96.9%
4010418 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 64.0 6.25e-01 90.4% 80.0%
3972189 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 67.0 6.68e-01 93.2% 92.0%
4507416 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 63.0 5.42e-01 89.0% 57.3%
3988654 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 60.0 6.34e-01 89.0% 93.8%
4038777 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 61.0 5.60e-01 87.7% 65.3%
148652 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 65.0 6.10e-01 91.8% 76.4%
3944738 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 67.0 6.64e-01 94.5% 94.7%
3277880 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 67.0 6.66e-01 94.5% 92.0%
3587807 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 61.0 6.42e-01 91.8% 96.9%
166742 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 61.0 6.48e-01 90.4% 100.0%
4605318 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 65.0 6.51e-01 93.2% 92.0%
3978391 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 63.0 6.43e-01 89.0% 92.9%
1320087 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 59.0 6.01e-01 83.6% 85.7%
4425759 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 61.0 5.30e-01 89.0% 57.3%
3972208 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 66.0 6.58e-01 97.3% 93.3%
3976255 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.76 65.0 6.44e-01 93.2% 90.7%
2766 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.76 59.0 6.23e-01 89.0% 98.4%
2773 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 65.0 6.41e-01 94.5% 96.1%
3508650 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 62.0 6.52e-01 91.8% 100.0%
4656409 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 63.0 6.49e-01 93.2% 98.6%
3589821 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 63.0 6.48e-01 93.2% 97.1%
140568 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 62.0 6.45e-01 94.5% 98.5%
2149183 10.12.1.50 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_26 0.75 64.0 4.58e-01 97.3% 32.6%
3288109 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 64.0 6.53e-01 94.5% 98.6%
3587762 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 63.0 5.92e-01 91.8% 77.3%
2833991 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 59.0 6.24e-01 89.0% 96.9%
3974079 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 60.0 5.36e-01 91.8% 61.9%
3969553 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 62.0 6.22e-01 91.8% 89.3%
3985012 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 59.0 5.88e-01 90.4% 84.0%
317430 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 62.0 6.50e-01 91.8% 100.0%
1185986 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 63.0 5.94e-01 93.2% 79.1%
3989752 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 64.0 6.34e-01 94.5% 96.0%
3965549 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 59.0 5.88e-01 89.0% 84.0%
5003294 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 62.0 6.23e-01 93.2% 90.7%
1181610 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 61.0 6.28e-01 93.2% 95.7%
3967226 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 59.0 6.08e-01 91.8% 92.9%
160875 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.73 61.0 6.17e-01 91.8% 98.6%
4155920 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 65.0 6.51e-01 100.0% 97.3%
4678741 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 64.0 6.41e-01 97.3% 100.0%
4032323 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 59.0 6.20e-01 90.4% 100.0%
4537353 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 58.0 4.87e-01 89.0% 50.4%
3588760 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 60.0 5.37e-01 93.2% 62.9%
2581392 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 62.0 6.32e-01 94.5% 97.2%
3990067 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 63.0 6.18e-01 97.3% 93.8%
4536849 10.12.1.146 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_3 0.73 62.0 3.89e-01 97.3% 17.6%
1916705 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.73 61.0 6.02e-01 91.8% 89.5%
3956747 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 57.0 5.98e-01 89.0% 96.9%
1487484 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 59.0 6.09e-01 89.0% 94.1%
3987836 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 60.0 6.18e-01 91.8% 95.7%
2149196 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 59.0 6.11e-01 93.2% 100.0%
5083215 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.72 57.0 5.93e-01 89.0% 96.9%
3980712 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 56.0 5.95e-01 90.4% 100.0%
4464505 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 57.0 6.01e-01 89.0% 98.5%
3988311 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 59.0 5.94e-01 94.5% 90.7%
3963744 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.70 55.0 5.38e-01 89.0% 78.8%
3988789 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 57.0 5.68e-01 91.8% 88.0%
3587619 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 56.0 5.73e-01 93.2% 100.0%
3970175 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 53.0 5.51e-01 89.0% 96.9%
3590127 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.67 55.0 5.22e-01 93.2% 79.5%
3589739 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 55.0 4.72e-01 94.5% 56.0%
3944622 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.65 54.0 5.28e-01 94.5% 90.0%
4455317 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.63 53.0 5.20e-01 94.5% 86.3%
5065183 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.61 49.0 4.63e-01 93.2% 74.7%
4348000 563.2.1.1 alpha bundles › ATPD N-terminal domain-like › Cas Cmr5-like › Cas Cmr5-like › Cas_Cmr5 0.59 42.0 3.67e-01 75.3% 48.7%