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SRR1747023_scaffold_5_prodigal-single.1__X__X__00250

Bact-Vir

SRR1747023_scaffold_5_prodigal-single.1__X__X__00250

Identity

Kingdom:
phage

Quality

69.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-62
PDB
Domain cluster: representative
CATH (83)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g6zA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 50.0 4.53e-01 71.2% 68.6%
2avwD01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.71 62.0 4.58e-01 100.0% 58.9%
1fouA02 2.40.500.10 Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) 0.70 59.0 4.44e-01 98.1% 48.5%
4c3xA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 55.0 3.34e-01 90.4% 87.6%
1mo9A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 57.0 4.20e-01 92.3% 64.4%
4udqA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 54.0 3.32e-01 90.4% 89.6%
5bulA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 54.0 3.24e-01 90.4% 70.7%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 5.62e-01 98.1% 100.0%
4ia6B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 54.0 3.41e-01 92.3% 76.1%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 5.36e-01 100.0% 95.9%
1u69D00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.67 50.0 3.58e-01 80.8% 59.9%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 5.16e-01 100.0% 81.7%
2ox7A01 2.30.30.310 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.65 55.0 5.28e-01 98.1% 100.0%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 40.0 3.69e-01 73.1% 45.1%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 54.0 5.40e-01 100.0% 96.2%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 55.0 5.22e-01 100.0% 95.2%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 52.0 4.94e-01 94.2% 96.8%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 55.0 5.26e-01 100.0% 96.8%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 4.85e-01 100.0% 77.6%
1xovA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 43.0 3.99e-01 84.6% 51.4%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 53.0 4.68e-01 100.0% 75.0%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 52.0 4.94e-01 96.2% 87.7%
4at0A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 55.0 3.36e-01 100.0% 89.9%
3lzwA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 54.0 4.22e-01 98.1% 98.3%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.63 54.0 4.55e-01 98.1% 83.3%
3f8tA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 47.0 4.18e-01 84.6% 83.7%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 4.88e-01 100.0% 81.4%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 51.0 5.05e-01 96.2% 98.2%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 50.0 4.92e-01 92.3% 100.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 4.81e-01 100.0% 87.5%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 44.0 4.15e-01 75.0% 96.8%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.62 52.0 5.02e-01 100.0% 86.4%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 51.0 4.93e-01 100.0% 83.3%
1ug1A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 52.0 4.41e-01 98.1% 69.6%
3kd9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 50.0 3.53e-01 90.4% 69.5%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 51.0 4.85e-01 98.1% 100.0%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 51.0 5.06e-01 98.1% 98.2%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 4.29e-01 100.0% 50.0%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 50.0 4.90e-01 98.1% 98.3%
7fctA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.61 43.0 2.83e-01 75.0% 68.9%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.67e-01 98.1% 75.0%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 4.79e-01 100.0% 100.0%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 4.28e-01 100.0% 59.2%
2dlpA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 49.0 4.34e-01 96.2% 70.6%
4mboA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 41.0 2.98e-01 71.2% 34.4%
1yt3A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.61 45.0 3.18e-01 84.6% 45.4%
2p25A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 45.0 3.47e-01 80.8% 82.4%
3au0A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 41.0 2.97e-01 71.2% 38.9%
3ossC00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.62e-01 90.4% 96.9%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.60 50.0 4.57e-01 98.1% 93.2%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.60 50.0 4.49e-01 100.0% 89.9%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 4.83e-01 100.0% 95.4%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.60 49.0 4.47e-01 100.0% 80.5%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.61e-01 100.0% 75.8%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 4.37e-01 100.0% 67.5%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 50.0 4.76e-01 100.0% 90.3%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 50.0 4.65e-01 98.1% 83.8%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.59 48.0 3.37e-01 92.3% 88.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 48.0 4.51e-01 98.1% 92.5%
1r7lA00 3.30.2120.10 Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like 0.58 41.0 3.38e-01 76.9% 81.6%
3ihpA03 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 44.0 2.73e-01 84.6% 88.1%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 4.30e-01 96.2% 78.7%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 45.0 4.39e-01 96.2% 96.7%
3irpX01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 38.0 2.81e-01 73.1% 67.8%
6hhuA01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 4.04e-01 100.0% 62.8%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 46.0 4.40e-01 100.0% 100.0%
3payB02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 42.0 3.32e-01 90.4% 94.7%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.55 45.0 4.37e-01 100.0% 88.3%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 44.0 3.70e-01 100.0% 50.5%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.55 45.0 3.73e-01 100.0% 68.3%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.55 46.0 3.94e-01 100.0% 85.9%
1u6lA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 38.0 2.93e-01 75.0% 34.1%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 43.0 3.61e-01 92.3% 63.9%
1wbaA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 44.0 3.22e-01 100.0% 91.2%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.54 43.0 3.69e-01 100.0% 61.2%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 41.0 2.97e-01 90.4% 92.9%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.53 43.0 4.20e-01 98.1% 87.7%
4bdxA00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.53 33.0 2.88e-01 80.8% 41.0%
2wanA01 2.60.40.1130 Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain 0.52 43.0 3.68e-01 100.0% 57.9%
4iopB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 39.0 3.05e-01 82.7% 81.8%
1e88A03 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.52 32.0 3.53e-01 80.8% 78.6%
4npsA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.54e-01 84.6% 70.7%
1bdoA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 38.0 3.42e-01 86.5% 90.0%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4154388 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 50.0 4.37e-01 75.0% 52.5%
3505711 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.70 62.0 5.29e-01 100.0% 68.2%
3519861 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.67e-01 96.2% 91.7%
4988955 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.69 60.0 5.81e-01 100.0% 91.7%
4583394 2003.1.2.63 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N, GMC_oxred_C, NAD_binding_8 0.69 55.0 3.29e-01 90.4% 83.5%
3517130 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.69 56.0 5.53e-01 96.2% 100.0%
4045147 2003.1.2.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.68 55.0 3.28e-01 90.4% 86.2%
3598499 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 58.0 4.28e-01 96.2% 38.6%
3505589 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.68 59.0 4.52e-01 98.1% 46.7%
3612090 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.55e-01 96.2% 91.7%
5025280 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.67 57.0 4.85e-01 100.0% 76.7%
3517415 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.66 59.0 5.51e-01 100.0% 90.8%
3183749 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.66 51.0 3.07e-01 88.5% 89.7%
5010554 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.65 56.0 5.30e-01 100.0% 87.7%
3512902 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.65 56.0 5.56e-01 96.2% 92.7%
3429053 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.65 51.0 3.62e-01 100.0% 27.0%
2575643 4.1.1.8 ↗ beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.65 54.0 4.97e-01 98.1% 72.5%
3925408 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 53.0 5.36e-01 98.1% 98.0%
3866038 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.65 51.0 4.39e-01 100.0% 54.1%
3585447 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 54.0 4.79e-01 98.1% 72.5%
3885696 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 53.0 5.05e-01 96.2% 89.2%
3542245 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 53.0 4.89e-01 96.2% 82.9%
3924149 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.31e-01 100.0% 98.0%
3911746 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.64 51.0 3.03e-01 90.4% 77.4%
4020558 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 53.0 5.01e-01 96.2% 90.8%
3620933 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 54.0 4.77e-01 100.0% 77.5%
3899829 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 53.0 4.84e-01 100.0% 78.7%
3903323 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 53.0 4.78e-01 98.1% 77.3%
4680376 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.64 48.0 4.83e-01 100.0% 83.6%
25838 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 53.0 4.75e-01 100.0% 81.0%
3915992 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.63 50.0 2.99e-01 90.4% 80.5%
3562710 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.63 51.0 3.06e-01 92.3% 84.4%
3771485 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 52.0 4.83e-01 98.1% 87.1%
3270547 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 4.87e-01 96.2% 89.2%
5029655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 5.26e-01 98.1% 88.3%
3896701 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 4.39e-01 96.2% 64.4%
3910605 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 4.55e-01 96.2% 78.8%
3522910 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 51.0 4.69e-01 98.1% 81.3%
3522718 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 49.0 4.78e-01 90.4% 98.3%
3916989 244.1.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.63 49.0 2.95e-01 90.4% 82.9%
3846069 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 4.87e-01 98.1% 89.2%
4610859 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 52.0 4.92e-01 98.1% 90.8%
3523584 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 4.66e-01 98.1% 82.7%
4644007 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.62 54.0 5.21e-01 98.1% 89.8%
3765007 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 51.0 4.73e-01 96.2% 82.9%
3618274 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 51.0 4.42e-01 98.1% 65.6%
3184612 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.51e-01 98.1% 93.8%
5049139 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.62 54.0 4.40e-01 100.0% 70.0%
4973749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 53.0 4.82e-01 98.1% 71.4%
3920897 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 49.0 4.49e-01 94.2% 81.3%
3561013 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 51.0 4.65e-01 100.0% 78.7%
3222146 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.61 48.0 4.53e-01 100.0% 72.3%
3503780 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 50.0 4.80e-01 100.0% 90.8%
5058103 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.81e-01 98.1% 79.4%
3231675 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 50.0 4.68e-01 98.1% 87.1%
3189501 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.39e-01 96.2% 88.7%
4621153 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.84e-01 96.2% 86.7%
3269589 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 50.0 4.64e-01 98.1% 84.3%
3747208 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 49.0 4.41e-01 96.2% 68.8%
3398175 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 51.0 4.83e-01 100.0% 92.3%
4138563 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.86e-01 98.1% 81.5%
4941620 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.95e-01 98.1% 88.3%
5069062 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.61 51.0 5.00e-01 98.1% 89.8%
3601281 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 41.0 3.11e-01 73.1% 95.7%
4484893 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.79e-01 96.2% 80.0%
3567457 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 50.0 4.67e-01 100.0% 84.3%
3927663 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.89e-01 100.0% 92.3%
4985969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 5.01e-01 98.1% 90.0%
3525376 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 49.0 4.64e-01 96.2% 93.8%
4354770 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.60 51.0 4.68e-01 96.2% 74.3%
3387119 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.60 51.0 4.35e-01 98.1% 61.1%
5042614 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.56e-01 94.2% 71.4%
3604145 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.48e-01 100.0% 76.7%
3914833 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 49.0 4.58e-01 98.1% 82.9%
5000726 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 44.0 3.44e-01 84.6% 93.8%
3502388 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.56e-01 98.1% 68.0%
3773481 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 47.0 4.26e-01 96.2% 78.8%
3482677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.55e-01 100.0% 88.6%
5035742 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.63e-01 98.1% 90.0%
3990857 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.61e-01 100.0% 90.0%
3498703 219.1.1.41 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 0.57 49.0 3.02e-01 100.0% 81.1%
3923470 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 47.0 4.35e-01 98.1% 98.6%
547 4.1.1.49 ↗ beta barrels › SH3 › SH3 › SH3 › KorB_C 0.57 45.0 4.53e-01 100.0% 90.7%
4883021 11.1.1.171 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 0.55 44.0 4.09e-01 100.0% 68.1%
4273033 3894.1.1.2 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfA_EBD 0.55 42.0 3.19e-01 90.4% 34.4%
3991253 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.52 42.0 3.08e-01 100.0% 30.3%
3923032 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.51 41.0 2.81e-01 100.0% 22.3%
3399218 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.50 40.0 2.74e-01 100.0% 22.9%
D2 high residues 64-138
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.96e-01 94.7% 78.1%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.67e-01 96.0% 76.8%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 44.0 4.69e-01 89.3% 79.7%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 4.68e-01 94.7% 78.1%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.62 51.0 3.77e-01 100.0% 34.2%
2d7eA01 3.40.1440.60 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain 0.62 40.0 3.79e-01 97.3% 54.4%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 43.0 4.56e-01 100.0% 83.3%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 4.46e-01 100.0% 59.0%
1boqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 46.0 4.16e-01 82.7% 89.7%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 4.99e-01 98.7% 94.4%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 3.76e-01 92.0% 46.6%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 47.0 4.85e-01 97.3% 93.1%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 4.74e-01 93.3% 96.8%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 45.0 4.19e-01 94.7% 70.5%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 41.0 3.86e-01 81.3% 87.9%
2gfuA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 3.75e-01 96.0% 50.0%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.01e-01 97.3% 63.0%
4r8tB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 39.0 3.97e-01 94.7% 78.1%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 35.0 3.40e-01 73.3% 58.3%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.71e-01 86.7% 78.0%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.54 46.0 4.19e-01 97.3% 76.0%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.54 42.0 3.34e-01 86.7% 62.1%
3h51A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 37.0 2.98e-01 70.7% 85.2%
2xu8A00 3.90.70.190 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) 0.54 45.0 3.98e-01 96.0% 63.8%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 43.0 3.86e-01 88.0% 91.6%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.71e-01 86.7% 84.5%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.85e-01 100.0% 77.6%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 46.0 3.62e-01 100.0% 90.1%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.52 44.0 3.59e-01 96.0% 97.9%
5e6tA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.52 39.0 3.64e-01 100.0% 64.9%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 40.0 3.65e-01 86.7% 87.5%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 36.0 3.84e-01 86.7% 90.3%
3vpyA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 36.0 2.98e-01 74.7% 78.6%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3373330 4.1.1.337 ↗ beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II 0.70 49.0 4.92e-01 92.0% 73.3%
3718894 220.1.1.175 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_31 0.67 54.0 4.00e-01 89.3% 62.5%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.64 44.0 4.67e-01 98.7% 83.1%
3688959 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.63 57.0 4.09e-01 100.0% 43.8%
3781440 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.60 54.0 5.34e-01 100.0% 95.0%
4644007 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.59 41.0 4.51e-01 86.7% 91.5%
147797 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.58 44.0 4.56e-01 88.0% 88.2%
5029655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 41.0 4.50e-01 89.3% 93.3%
3449628 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.57 46.0 3.97e-01 86.7% 74.8%
3185321 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.57 47.0 4.78e-01 96.0% 93.3%
3393358 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 43.0 4.02e-01 94.7% 66.3%
3768116 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.55 47.0 3.37e-01 93.3% 32.6%
3553413 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.55 46.0 4.49e-01 93.3% 82.4%
3249895 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.55 44.0 4.53e-01 86.7% 95.7%
3257607 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 47.0 4.73e-01 98.7% 94.7%
3492026 4.1.1.129 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_5 0.55 47.0 4.22e-01 100.0% 68.6%
3812766 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.54 46.0 4.76e-01 100.0% 100.0%
4606362 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 36.0 3.46e-01 73.3% 60.0%
4938400 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.54 43.0 3.75e-01 86.7% 85.2%
135442 220.1.1.42 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › INPP5B_PH 0.54 42.0 3.37e-01 86.7% 64.1%
4019128 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.54 43.0 3.32e-01 92.0% 86.3%
3974170 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 46.0 4.26e-01 100.0% 75.0%
3645842 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.53 40.0 4.00e-01 85.3% 78.8%
4343392 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 41.0 3.66e-01 86.7% 81.8%
3676628 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.52 41.0 3.56e-01 86.7% 55.0%
2323851 1196.1.1.0 ↗ 0.52 40.0 2.79e-01 88.0% 29.7%
4941620 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 35.0 3.80e-01 86.7% 91.7%