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SRR1747023_scaffold_5_prodigal-single.1__X__X__00281
Bact-VirSRR1747023_scaffold_5_prodigal-single.1__X__X__00281
Identity
- Kingdom:
- phage
Quality
71.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-108
Domain cluster:
rep: HQ268735.1__ADT64076.1__X__00069__D1-103
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.83 | 65.0 | 6.93e-01 | 83.3% | 92.6% |
| 4cxfA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.78 | 59.0 | 6.48e-01 | 79.6% | 97.7% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.70 | 50.0 | 5.51e-01 | 73.1% | 92.9% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.69 | 62.0 | 5.19e-01 | 99.1% | 98.4% |
| 6ldiF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 55.0 | 5.84e-01 | 98.1% | 100.0% |
| 2qibB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 49.0 | 4.05e-01 | 88.0% | 62.0% |
| 1vi0A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 47.0 | 4.28e-01 | 83.3% | 93.1% |
| 2osaA00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.59 | 41.0 | 3.36e-01 | 70.4% | 80.1% |
| 2ibdA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 45.0 | 4.11e-01 | 85.2% | 93.2% |
| 3eyxA00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.57 | 39.0 | 3.21e-01 | 70.4% | 65.5% |
| 3nxcA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 43.0 | 3.69e-01 | 84.3% | 72.9% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 43.0 | 3.98e-01 | 85.2% | 92.3% |
| 2zy9A03 | 1.10.357.20 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain | 0.55 | 42.0 | 3.64e-01 | 82.4% | 67.8% |
| 6ofuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 38.0 | 2.94e-01 | 73.1% | 88.0% |
| 4i4cB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 42.0 | 2.86e-01 | 85.2% | 71.9% |
| 6wk3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 37.0 | 3.41e-01 | 73.1% | 88.3% |
| 3ikhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 45.0 | 3.40e-01 | 100.0% | 82.9% |
| 1jr3C02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.51 | 38.0 | 3.72e-01 | 79.6% | 100.0% |
| 2pz9A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 39.0 | 3.37e-01 | 83.3% | 69.3% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032673 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 66.0 | 4.95e-01 | 85.2% | 38.0% |
| 4814 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.81 | 64.0 | 6.30e-01 | 81.5% | 77.9% |
| 4995712 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.78 | 63.0 | 6.67e-01 | 84.3% | 100.0% |
| 3278088 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.75 | 58.0 | 5.77e-01 | 80.6% | 85.5% |
| 3971939 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.75 | 51.0 | 5.68e-01 | 70.4% | 90.6% |
| 4631806 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.75 | 62.0 | 4.98e-01 | 88.0% | 51.0% |
| None | — | 0.74 | 60.0 | 4.56e-01 | 86.1% | 40.0% | |
| 3284461 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 60.0 | 4.49e-01 | 85.2% | 38.8% |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.74 | 60.0 | 4.55e-01 | 86.1% | 40.0% |
| 3284984 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.74 | 61.0 | 4.58e-01 | 88.0% | 39.4% |
| 3676572 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.74 | 58.0 | 4.96e-01 | 84.3% | 76.6% |
| 3828850 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.72 | 64.0 | 5.66e-01 | 94.4% | 90.7% |
| None | — | 0.72 | 64.0 | 5.68e-01 | 95.4% | 94.7% | |
| 4274766 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.72 | 63.0 | 6.44e-01 | 99.1% | 98.1% |
| 4258677 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.72 | 62.0 | 4.80e-01 | 92.6% | 45.8% |
| 4524644 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.72 | 60.0 | 4.80e-01 | 92.6% | 47.3% |
| None | — | 0.71 | 61.0 | 4.82e-01 | 92.6% | 46.8% | |
| 4513974 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.71 | 62.0 | 5.97e-01 | 92.6% | 86.7% |
| 4349095 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.70 | 59.0 | 5.79e-01 | 90.7% | 86.1% |
| 3360961 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.69 | 62.0 | 5.29e-01 | 99.1% | 85.7% |
| None | — | 0.68 | 61.0 | 4.25e-01 | 98.1% | 32.3% | |
| 3428775 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 61.0 | 4.38e-01 | 99.1% | 47.3% |
| 3664504 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.68 | 61.0 | 5.34e-01 | 98.1% | 91.8% |
| 4452096 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.68 | 61.0 | 5.01e-01 | 99.1% | 99.5% |
| 4624390 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.67 | 60.0 | 5.88e-01 | 98.1% | 91.3% |
| 4053923 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.67 | 60.0 | 6.09e-01 | 98.1% | 100.0% |
| 4269761 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.67 | 60.0 | 5.01e-01 | 99.1% | 99.5% |
| 3090120 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.66 | 59.0 | 5.81e-01 | 99.1% | 95.8% |
| 3972284 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.66 | 59.0 | 5.79e-01 | 98.1% | 91.3% |
| 4570076 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.66 | 59.0 | 4.38e-01 | 99.1% | 39.6% |
| 3590444 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.63 | 51.0 | 4.03e-01 | 88.0% | 75.6% |
| 3973396 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.62 | 40.0 | 4.28e-01 | 80.6% | 73.7% |
| 5079439 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.51 | 38.0 | 3.91e-01 | 83.3% | 81.9% |
D2
high
residues 153-209
Domain cluster:
representative
CATH (93)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.96 | 70.0 | 7.09e-01 | 75.4% | 76.8% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.96 | 68.0 | 6.80e-01 | 73.7% | 72.4% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.95 | 73.0 | 7.32e-01 | 80.7% | 79.3% |
| 6jqsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.92 | 76.0 | 7.09e-01 | 86.0% | 85.1% |
| 3c57B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.91 | 68.0 | 7.28e-01 | 80.7% | 91.8% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 74.0 | 6.44e-01 | 87.7% | 61.3% |
| 2e7xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 66.0 | 6.93e-01 | 77.2% | 88.5% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 72.0 | 6.69e-01 | 89.5% | 70.0% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 80.0 | 7.66e-01 | 100.0% | 86.2% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 79.0 | 7.23e-01 | 98.2% | 76.4% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 63.0 | 6.00e-01 | 75.4% | 65.2% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.88 | 60.0 | 6.12e-01 | 71.9% | 73.2% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 71.0 | 6.83e-01 | 86.0% | 88.9% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 64.0 | 6.16e-01 | 77.2% | 71.4% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.87 | 57.0 | 6.35e-01 | 71.9% | 86.7% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 62.0 | 5.32e-01 | 75.4% | 50.6% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 66.0 | 6.77e-01 | 80.7% | 87.0% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 61.0 | 6.54e-01 | 75.4% | 90.0% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 69.0 | 7.08e-01 | 87.7% | 89.1% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.85 | 65.0 | 5.11e-01 | 80.7% | 42.2% |
| 1lvaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 62.0 | 6.05e-01 | 77.2% | 77.4% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 63.0 | 6.69e-01 | 78.9% | 94.0% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 61.0 | 5.96e-01 | 77.2% | 73.0% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 63.0 | 6.10e-01 | 78.9% | 100.0% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 65.0 | 6.71e-01 | 82.5% | 90.7% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 61.0 | 5.62e-01 | 77.2% | 69.4% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.84 | 57.0 | 5.80e-01 | 70.2% | 87.3% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 63.0 | 4.76e-01 | 80.7% | 48.8% |
| 1s7oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 72.0 | 5.81e-01 | 98.2% | 51.4% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 76.0 | 6.78e-01 | 96.5% | 73.3% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 75.0 | 7.21e-01 | 98.2% | 90.6% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 71.0 | 6.06e-01 | 96.5% | 59.8% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.83 | 59.0 | 6.01e-01 | 75.4% | 76.8% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.82 | 75.0 | 4.92e-01 | 96.5% | 26.7% |
| 2vxzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 60.0 | 5.70e-01 | 77.2% | 68.2% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 75.0 | 7.21e-01 | 98.2% | 90.5% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.82 | 75.0 | 5.49e-01 | 100.0% | 42.3% |
| 1biaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 62.0 | 6.01e-01 | 80.7% | 75.0% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 73.0 | 7.14e-01 | 98.2% | 96.7% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 57.0 | 6.04e-01 | 73.7% | 82.4% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 73.0 | 7.24e-01 | 100.0% | 95.0% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 65.0 | 5.54e-01 | 89.5% | 55.1% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 61.0 | 5.23e-01 | 80.7% | 51.1% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 61.0 | 5.26e-01 | 80.7% | 53.4% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 66.0 | 4.90e-01 | 89.5% | 36.9% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.81 | 72.0 | 5.36e-01 | 100.0% | 41.1% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 60.0 | 5.60e-01 | 80.7% | 73.2% |
| 4nvsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.80 | 56.0 | 4.00e-01 | 73.7% | 52.9% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 72.0 | 6.40e-01 | 100.0% | 77.5% |
| 2gxgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 64.0 | 4.76e-01 | 87.7% | 50.0% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.80 | 61.0 | 4.57e-01 | 80.7% | 65.1% |
| 3hhgE01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 61.0 | 5.24e-01 | 82.5% | 53.4% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 62.0 | 4.69e-01 | 84.2% | 41.9% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 70.0 | 6.32e-01 | 96.5% | 72.4% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 63.0 | 4.56e-01 | 87.7% | 41.7% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.79 | 57.0 | 4.76e-01 | 82.5% | 45.4% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 57.0 | 5.39e-01 | 77.2% | 68.7% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 61.0 | 4.95e-01 | 84.2% | 71.2% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.78 | 68.0 | 5.16e-01 | 96.5% | 46.6% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 63.0 | 5.30e-01 | 87.7% | 57.0% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 67.0 | 6.35e-01 | 94.7% | 86.4% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 53.0 | 5.91e-01 | 71.9% | 95.5% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 55.0 | 5.50e-01 | 73.7% | 75.9% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.77 | 68.0 | 5.77e-01 | 100.0% | 62.8% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 59.0 | 4.35e-01 | 84.2% | 34.4% |
| 2hr3D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 56.0 | 5.43e-01 | 77.2% | 74.2% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 52.0 | 5.91e-01 | 71.9% | 100.0% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 57.0 | 4.88e-01 | 84.2% | 54.3% |
| 5douA01 | 1.10.1030.10 | Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | 0.74 | 58.0 | 4.11e-01 | 86.0% | 59.6% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.74 | 64.0 | 4.15e-01 | 96.5% | 43.4% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 52.0 | 4.68e-01 | 73.7% | 55.3% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 4.89e-01 | 78.9% | 79.5% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 49.0 | 4.61e-01 | 71.9% | 57.1% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 52.0 | 4.76e-01 | 75.4% | 64.5% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 54.0 | 4.68e-01 | 78.9% | 83.7% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 58.0 | 4.34e-01 | 87.7% | 51.1% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 56.0 | 4.97e-01 | 86.0% | 65.9% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 54.0 | 4.96e-01 | 80.7% | 85.5% |
| 2d1hB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 64.0 | 5.34e-01 | 100.0% | 86.7% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 51.0 | 4.86e-01 | 73.7% | 64.6% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 4.20e-01 | 84.2% | 60.8% |
| 4gqmA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 46.0 | 3.68e-01 | 70.2% | 36.2% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 46.0 | 4.44e-01 | 78.9% | 59.1% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 4.69e-01 | 80.7% | 86.3% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 45.0 | 4.24e-01 | 71.9% | 58.8% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 47.0 | 4.55e-01 | 80.7% | 67.2% |
| 2k9qA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 44.0 | 5.10e-01 | 89.5% | 100.0% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 48.0 | 4.01e-01 | 84.2% | 85.6% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 45.0 | 3.92e-01 | 78.9% | 100.0% |
| 3cecA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 45.0 | 3.97e-01 | 84.2% | 85.7% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 45.0 | 4.04e-01 | 84.2% | 86.6% |
| 3bs3A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 44.0 | 4.40e-01 | 82.5% | 100.0% |
| 7ymiD01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.52 | 45.0 | 3.14e-01 | 94.7% | 56.7% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942695 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.99 | 77.0 | 7.28e-01 | 80.7% | 70.8% |
| 4010691 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.97 | 75.0 | 7.67e-01 | 80.7% | 83.6% |
| 4606780 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.96 | 75.0 | 7.37e-01 | 80.7% | 76.7% |
| 3945377 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.96 | 76.0 | 7.22e-01 | 84.2% | 72.3% |
| 3972360 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.95 | 80.0 | 7.85e-01 | 91.2% | 83.3% |
| 3976103 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.95 | 76.0 | 7.25e-01 | 84.2% | 73.8% |
| 5056682 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.95 | 71.0 | 6.59e-01 | 78.9% | 64.3% |
| 3279743 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.95 | 78.0 | 7.14e-01 | 91.2% | 70.0% |
| 3947091 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.94 | 73.0 | 7.18e-01 | 80.7% | 76.7% |
| 3942478 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.94 | 74.0 | 7.59e-01 | 82.5% | 85.5% |
| 4960928 | 101.1.3.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4 | 0.94 | 73.0 | 7.23e-01 | 82.5% | 78.3% |
| 4927434 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.94 | 63.0 | 7.11e-01 | 73.7% | 88.9% |
| 3944309 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.93 | 74.0 | 7.86e-01 | 82.5% | 94.0% |
| 3966025 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.93 | 75.0 | 6.77e-01 | 84.2% | 64.9% |
| 4979402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.93 | 69.0 | 6.81e-01 | 77.2% | 73.3% |
| 4034200 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.93 | 87.0 | 8.25e-01 | 100.0% | 86.2% |
| 4139052 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 87.0 | 7.77e-01 | 100.0% | 74.7% |
| 3974013 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.93 | 76.0 | 7.51e-01 | 89.5% | 81.7% |
| 4008147 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.93 | 75.0 | 7.15e-01 | 84.2% | 73.8% |
| 3090474 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.93 | 74.0 | 5.38e-01 | 84.2% | 34.8% |
| 3972272 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.92 | 74.0 | 6.63e-01 | 84.2% | 64.0% |
| 3286659 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.92 | 77.0 | 7.09e-01 | 91.2% | 71.4% |
| 3706139 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 68.0 | 7.23e-01 | 77.2% | 88.0% |
| 5020571 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.92 | 72.0 | 5.62e-01 | 80.7% | 43.8% |
| 3640035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 65.0 | 5.56e-01 | 77.2% | 49.4% |
| 4030763 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.92 | 76.0 | 7.19e-01 | 89.5% | 75.4% |
| 4946254 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 65.0 | 7.21e-01 | 73.7% | 93.3% |
| 5011648 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.91 | 63.0 | 6.75e-01 | 71.9% | 82.0% |
| 3979166 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.91 | 82.0 | 7.58e-01 | 98.2% | 78.6% |
| 3587538 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.91 | 83.0 | 7.73e-01 | 100.0% | 82.4% |
| 4202221 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.90 | 82.0 | 7.71e-01 | 100.0% | 82.4% |
| 4492035 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.90 | 75.0 | 6.94e-01 | 89.5% | 71.4% |
| 4956784 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.90 | 66.0 | 6.11e-01 | 77.2% | 65.7% |
| 3943462 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 68.0 | 6.93e-01 | 80.7% | 83.6% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.89 | 81.0 | 7.27e-01 | 98.2% | 73.3% |
| 3941764 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.89 | 71.0 | 6.80e-01 | 84.2% | 73.8% |
| 3991300 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 61.0 | 5.39e-01 | 75.4% | 51.2% |
| 5014584 | 101.1.2.932 ↗ | alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc | 0.89 | 67.0 | 5.72e-01 | 78.9% | 96.5% |
| 3977009 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.89 | 69.0 | 6.39e-01 | 82.5% | 67.1% |
| 4990647 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 61.0 | 6.26e-01 | 71.9% | 74.5% |
| 3946608 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 78.0 | 7.15e-01 | 93.0% | 78.6% |
| 3941460 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 70.0 | 6.68e-01 | 84.2% | 73.8% |
| 5004841 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 61.0 | 5.82e-01 | 71.9% | 63.1% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.88 | 81.0 | 5.50e-01 | 100.0% | 31.1% |
| 1177545 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 71.0 | 6.67e-01 | 89.5% | 72.1% |
| 4243530 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.88 | 78.0 | 7.52e-01 | 100.0% | 86.2% |
| 4162857 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.88 | 59.0 | 6.28e-01 | 70.2% | 80.0% |
| 5028266 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 62.0 | 6.13e-01 | 75.4% | 71.2% |
| 4031535 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.87 | 78.0 | 7.69e-01 | 100.0% | 93.3% |
| 4952035 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.87 | 59.0 | 5.83e-01 | 73.7% | 66.7% |
| 4334657 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.87 | 58.0 | 6.39e-01 | 73.7% | 86.7% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 68.0 | 6.72e-01 | 82.5% | 78.3% |
| 5022417 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.87 | 75.0 | 6.49e-01 | 93.0% | 64.7% |
| 3789627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 62.0 | 5.98e-01 | 75.4% | 66.2% |
| 3603167 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.86 | 61.0 | 5.81e-01 | 75.4% | 64.6% |
| 5024511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 58.0 | 6.14e-01 | 70.2% | 80.0% |
| 4031116 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 59.0 | 5.83e-01 | 71.9% | 68.3% |
| 4957415 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.86 | 61.0 | 6.06e-01 | 75.4% | 71.7% |
| 3281819 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.85 | 62.0 | 5.52e-01 | 77.2% | 61.3% |
| 4031756 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.85 | 73.0 | 6.18e-01 | 89.5% | 70.6% |
| 3946793 | 101.1.1.259 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 | 0.85 | 60.0 | 4.66e-01 | 73.7% | 36.5% |
| 5045332 | 101.1.2.294 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF742 | 0.85 | 73.0 | 7.21e-01 | 94.7% | 88.3% |
| 4996898 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 69.0 | 6.66e-01 | 94.7% | 78.1% |
| 3904156 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 57.0 | 6.33e-01 | 70.2% | 88.9% |
| 3590732 | 101.1.1.364 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 | 0.84 | 59.0 | 6.51e-01 | 73.7% | 93.3% |
| 3933366 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.84 | 60.0 | 5.61e-01 | 75.4% | 61.4% |
| 4131887 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.84 | 78.0 | 6.84e-01 | 98.2% | 74.7% |
| 4977403 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 70.0 | 6.87e-01 | 94.7% | 85.0% |
| 4551350 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.84 | 75.0 | 6.20e-01 | 96.5% | 58.9% |
| 4214308 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.84 | 77.0 | 6.63e-01 | 100.0% | 70.6% |
| 3980681 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.84 | 78.0 | 6.83e-01 | 100.0% | 83.7% |
| 4937081 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 78.0 | 7.37e-01 | 98.2% | 87.7% |
| 4458444 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 76.0 | 6.31e-01 | 100.0% | 60.0% |
| 4002905 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 61.0 | 5.90e-01 | 78.9% | 70.8% |
| 4993585 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 59.0 | 5.80e-01 | 73.7% | 70.0% |
| 2761 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.83 | 71.0 | 6.06e-01 | 96.5% | 59.8% |
| 3971990 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.83 | 75.0 | 6.44e-01 | 96.5% | 64.7% |
| 5030780 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.83 | 61.0 | 6.41e-01 | 78.9% | 90.0% |
| 4560931 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 70.0 | 6.36e-01 | 98.2% | 70.7% |
| 4321867 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.81 | 69.0 | 6.42e-01 | 93.0% | 77.1% |
| 4004247 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.81 | 74.0 | 6.56e-01 | 100.0% | 82.5% |
| 3753093 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.81 | 58.0 | 5.55e-01 | 75.4% | 66.2% |
| 5025805 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 65.0 | 6.63e-01 | 91.2% | 90.9% |
| 3544647 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.80 | 61.0 | 5.84e-01 | 80.7% | 72.3% |
| 5020331 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 72.0 | 6.90e-01 | 98.2% | 93.8% |
| 4002185 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.79 | 58.0 | 5.25e-01 | 78.9% | 58.7% |
| 5003692 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.79 | 70.0 | 6.66e-01 | 96.5% | 95.4% |
| 4961899 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.78 | 70.0 | 6.70e-01 | 100.0% | 89.2% |
| 3932988 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 58.0 | 5.90e-01 | 78.9% | 94.5% |
| 3693312 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 57.0 | 5.64e-01 | 80.7% | 83.3% |
| 3976506 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.76 | 66.0 | 6.04e-01 | 98.2% | 80.0% |
| 5039663 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 64.0 | 5.77e-01 | 93.0% | 72.0% |
| 3410877 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 54.0 | 5.08e-01 | 78.9% | 65.7% |
| 3243649 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.73 | 65.0 | 5.60e-01 | 100.0% | 95.6% |
| 5041148 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 63.0 | 5.87e-01 | 94.7% | 77.1% |
| 3707741 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 58.0 | 5.54e-01 | 94.7% | 92.3% |