←Back to structures
SRR1747026_scaffold_22_prodigal-single.1__X__X__00004
Bact-VirSRR1747026_scaffold_22_prodigal-single.1__X__X__00004
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-147
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4k5yA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.69 | 52.0 | 4.22e-01 | 79.4% | 93.1% |
| 4hyjA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.68 | 54.0 | 4.43e-01 | 84.0% | 91.9% |
| 2e87A01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 47.0 | 4.40e-01 | 71.8% | 91.9% |
| 1i1rB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 45.0 | 4.18e-01 | 70.2% | 97.6% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 49.0 | 4.21e-01 | 80.9% | 85.3% |
| 7ys6A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.63 | 50.0 | 3.99e-01 | 85.5% | 97.0% |
| 6c1qB02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.62 | 48.0 | 3.86e-01 | 84.7% | 95.0% |
| 1f6fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 41.0 | 3.68e-01 | 70.2% | 89.6% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.58 | 35.0 | 3.86e-01 | 80.9% | 74.5% |
| 4d2dA00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.56 | 49.0 | 3.37e-01 | 95.4% | 91.8% |
| 3vwbA00 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 31.0 | 3.33e-01 | 99.2% | 61.2% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 38.0 | 3.61e-01 | 71.0% | 77.2% |
| 3hzrA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.55 | 39.0 | 4.19e-01 | 74.0% | 87.4% |
| 2g2dA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.54 | 42.0 | 3.99e-01 | 83.2% | 88.1% |
| 2fgyA01 | 1.20.120.1310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain | 0.54 | 34.0 | 3.74e-01 | 73.3% | 77.6% |
| 2kbwA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.53 | 42.0 | 4.05e-01 | 84.7% | 97.4% |
| 6d5xA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.53 | 42.0 | 4.02e-01 | 84.7% | 88.7% |
| 4dwpA01 | 6.10.140.1780 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 34.0 | 3.94e-01 | 71.0% | 93.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3346328 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.70 | 49.0 | 4.73e-01 | 71.0% | 67.6% |
| 3819266 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.68 | 51.0 | 4.34e-01 | 78.6% | 76.2% |
| 3520909 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.66 | 52.0 | 4.11e-01 | 83.2% | 78.1% |
| 4417622 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.64 | 49.0 | 4.13e-01 | 80.2% | 61.4% |
| 3219705 | 5001.1.1.16 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srt | 0.63 | 50.0 | 3.80e-01 | 84.7% | 81.6% |
| 3234771 | 5001.1.1.54 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srbc | 0.62 | 49.0 | 3.81e-01 | 83.2% | 90.7% |
| 4030224 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.59 | 41.0 | 4.13e-01 | 72.5% | 94.8% |
| 3213535 | 5001.1.1.54 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srbc | 0.57 | 45.0 | 3.58e-01 | 86.3% | 88.6% |
| 4999910 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.56 | 43.0 | 3.20e-01 | 82.4% | 60.5% |
| 3173310 | 3352.1.1.6 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Glyco_transf_22 | 0.55 | 43.0 | 3.13e-01 | 83.2% | 55.7% |
| 4634670 | 5067.1.1.1 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › ACR_tran | 0.54 | 38.0 | 3.25e-01 | 71.8% | 92.1% |
| 4957365 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.53 | 32.0 | 3.50e-01 | 76.3% | 70.9% |
| 5076444 | 604.5.1.1 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div | 0.53 | 38.0 | 3.29e-01 | 73.3% | 98.6% |
| 3962438 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.53 | 36.0 | 3.11e-01 | 70.2% | 78.6% |
| 4083844 | 193.1.1.3 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › Ndc80_HEC | 0.52 | 40.0 | 4.16e-01 | 83.2% | 86.4% |
| 3594379 | 109.5.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › adenylylcyclase associated protein, CAP-N › adenylylcyclase associated protein, CAP-N | 0.52 | 41.0 | 3.53e-01 | 84.0% | 70.5% |
| 4361615 | 5067.1.1.2 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › SecD_SecF | 0.52 | 37.0 | 3.14e-01 | 72.5% | 92.6% |
| 3416366 | 3352.1.1.28 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT+PMT_4TMC | 0.51 | 39.0 | 2.85e-01 | 83.2% | 54.3% |
| 3262205 | 633.24.1.0 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain | 0.50 | 32.0 | 3.75e-01 | 84.0% | 93.3% |