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SRR1747026_scaffold_22_prodigal-single.1__X__X__00027
Bact-VirSRR1747026_scaffold_22_prodigal-single.1__X__X__00027
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-19_35-87
Domain cluster:
rep: MG752970.1__AVH85358.1__RsoM2USA_430__00430__D11-89
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00166.27 best | Cpn10 | 27.8 | 2.90e-06 | 100.0% | 66.7% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.86 | 79.0 | 6.80e-01 | 100.0% | 87.8% |
| 6mrc100 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.83 | 76.0 | 6.51e-01 | 100.0% | 85.0% |
| 1qorA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.68 | 62.0 | 4.46e-01 | 100.0% | 43.9% |
| 5dovB01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.68 | 62.0 | 4.35e-01 | 100.0% | 44.7% |
| 2vn8A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.68 | 62.0 | 4.48e-01 | 100.0% | 55.4% |
| 2vcyA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.68 | 61.0 | 4.42e-01 | 100.0% | 45.0% |
| 5k1sB00 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.68 | 61.0 | 3.84e-01 | 100.0% | 28.5% |
| 3uogA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.68 | 61.0 | 4.32e-01 | 100.0% | 52.8% |
| 3gazA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.68 | 61.0 | 4.53e-01 | 100.0% | 52.1% |
| 1n9gA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.67 | 61.0 | 4.21e-01 | 100.0% | 43.5% |
| 1wlyA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.67 | 60.0 | 4.40e-01 | 100.0% | 41.7% |
| 5ylnB01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.67 | 60.0 | 4.18e-01 | 100.0% | 50.7% |
| 3qwbA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.66 | 60.0 | 4.27e-01 | 100.0% | 41.6% |
| 4dupA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.66 | 60.0 | 4.25e-01 | 100.0% | 42.8% |
| 4a27A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.66 | 60.0 | 4.45e-01 | 100.0% | 50.6% |
| 3slkA02 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.65 | 59.0 | 3.70e-01 | 100.0% | 22.6% |
| 2j4xA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 47.0 | 4.58e-01 | 78.5% | 93.1% |
| 3b70A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.65 | 57.0 | 4.26e-01 | 100.0% | 50.3% |
| 3gmsA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.64 | 56.0 | 3.98e-01 | 100.0% | 39.0% |
| 4ilkA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.63 | 56.0 | 3.97e-01 | 100.0% | 51.5% |
| 3gohA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.62 | 55.0 | 3.98e-01 | 100.0% | 43.9% |
| 1wqsA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 38.0 | 3.72e-01 | 95.4% | 61.4% |
| 1xweA01 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 50.0 | 3.95e-01 | 100.0% | 53.8% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 43.0 | 3.83e-01 | 81.5% | 67.7% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 38.0 | 3.82e-01 | 83.1% | 66.2% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.57 | 41.0 | 2.88e-01 | 81.5% | 23.5% |
| 1hh2P02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 42.0 | 4.33e-01 | 100.0% | 90.5% |
| 2gmqA00 | 2.40.450.10 | Mainly Beta › Beta Barrel › PUA domain-like fold › PUA domain-like domain | 0.51 | 37.0 | 3.34e-01 | 81.5% | 98.0% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4173931 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.87 | 81.0 | 7.00e-01 | 100.0% | 89.5% |
| 4182470 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.86 | 80.0 | 6.94e-01 | 100.0% | 89.4% |
| 3359945 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.86 | 79.0 | 6.80e-01 | 100.0% | 81.4% |
| 3938500 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.85 | 78.0 | 6.89e-01 | 98.5% | 93.3% |
| 4341607 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.85 | 79.0 | 6.76e-01 | 100.0% | 86.7% |
| 4082853 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.85 | 79.0 | 6.86e-01 | 100.0% | 89.4% |
| 4378688 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.85 | 79.0 | 6.82e-01 | 100.0% | 89.5% |
| 3594024 | 236.1.2.0 ↗ | beta barrels › GroES-like › GroES-related › GroES | 0.83 | 76.0 | 6.77e-01 | 100.0% | 88.9% |
| 4029028 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.82 | 76.0 | 6.45e-01 | 100.0% | 86.0% |
| 4417276 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.82 | 75.0 | 6.40e-01 | 100.0% | 91.0% |
| 4024554 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.80 | 73.0 | 6.31e-01 | 100.0% | 89.8% |
| 3674955 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.80 | 75.0 | 6.93e-01 | 100.0% | 82.5% |
| 2794379 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.77 | 69.0 | 6.06e-01 | 100.0% | 84.2% |
| 3282182 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.69 | 64.0 | 4.55e-01 | 100.0% | 45.6% |
| 3886963 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.69 | 63.0 | 4.37e-01 | 100.0% | 42.9% |
| 4030636 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.69 | 63.0 | 3.98e-01 | 100.0% | 22.3% |
| 3686595 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.69 | 63.0 | 4.63e-01 | 100.0% | 51.5% |
| 4126814 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.69 | 63.0 | 4.54e-01 | 100.0% | 47.4% |
| 4941767 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.69 | 63.0 | 4.40e-01 | 100.0% | 52.8% |
| 3461033 | 236.1.1.2 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 | 0.68 | 61.0 | 4.60e-01 | 100.0% | 51.0% |
| 5018104 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.68 | 62.0 | 3.80e-01 | 100.0% | 31.2% |
| 3686467 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.68 | 62.0 | 4.47e-01 | 100.0% | 41.7% |
| 5025291 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.68 | 61.0 | 4.50e-01 | 98.5% | 65.0% |
| 4581369 | 4.1.1.166 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2314 | 0.68 | 53.0 | 4.50e-01 | 84.6% | 53.3% |
| 3372987 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.68 | 61.0 | 4.34e-01 | 100.0% | 42.1% |
| 4004815 | 4.1.1.166 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2314 | 0.68 | 53.0 | 4.26e-01 | 84.6% | 44.7% |
| 3283165 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.68 | 61.0 | 4.30e-01 | 100.0% | 41.0% |
| 4068091 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.67 | 62.0 | 4.48e-01 | 100.0% | 44.7% |
| 3457826 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.67 | 61.0 | 4.98e-01 | 98.5% | 71.3% |
| 3736835 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.67 | 60.0 | 4.13e-01 | 100.0% | 56.9% |
| 3435718 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.67 | 61.0 | 5.02e-01 | 100.0% | 69.6% |
| 4020035 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.67 | 61.0 | 4.18e-01 | 100.0% | 59.1% |
| 4487318 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.67 | 61.0 | 4.44e-01 | 100.0% | 44.1% |
| 3921403 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.67 | 61.0 | 4.56e-01 | 100.0% | 51.0% |
| 5020601 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.67 | 60.0 | 4.28e-01 | 98.5% | 61.1% |
| 3206542 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.67 | 59.0 | 4.68e-01 | 96.9% | 74.6% |
| 4012930 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.67 | 60.0 | 4.67e-01 | 100.0% | 47.4% |
| 4053749 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.67 | 60.0 | 4.41e-01 | 100.0% | 42.9% |
| 3949453 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.66 | 60.0 | 4.47e-01 | 100.0% | 50.0% |
| 3185435 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.66 | 60.0 | 4.39e-01 | 100.0% | 46.5% |
| 3828161 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.66 | 59.0 | 4.44e-01 | 100.0% | 50.0% |
| 3599543 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.66 | 60.0 | 4.61e-01 | 98.5% | 55.0% |
| 3286331 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.66 | 59.0 | 5.47e-01 | 96.9% | 100.0% |
| 3946675 | 236.1.1.2 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 | 0.66 | 60.0 | 4.45e-01 | 100.0% | 53.1% |
| 4357990 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.66 | 61.0 | 4.37e-01 | 100.0% | 42.3% |
| 3970638 | 236.1.1.2 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 | 0.66 | 59.0 | 4.44e-01 | 100.0% | 53.5% |
| 3476684 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.65 | 58.0 | 4.27e-01 | 100.0% | 48.8% |
| 3096364 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.65 | 58.0 | 4.73e-01 | 100.0% | 68.9% |
| 3688377 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.65 | 58.0 | 4.47e-01 | 98.5% | 55.0% |
| 3274727 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.65 | 53.0 | 4.02e-01 | 90.8% | 75.3% |
| 3289228 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.64 | 57.0 | 4.41e-01 | 98.5% | 55.0% |
| 5080202 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.63 | 46.0 | 3.75e-01 | 78.5% | 94.4% |
| 4951886 | 3174.4.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Hypothetical protein NegoA.19184.a N-terminal domain › Hypothetical protein NegoA.19184.a N-terminal domain | 0.63 | 48.0 | 4.33e-01 | 98.5% | 58.9% |
| 3594384 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.63 | 54.0 | 4.22e-01 | 95.4% | 56.4% |
| 4476444 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.54 | 36.0 | 3.82e-01 | 93.8% | 83.6% |
| 3812263 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.53 | 40.0 | 3.32e-01 | 83.1% | 88.3% |
| 3263398 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.52 | 39.0 | 3.27e-01 | 84.6% | 92.0% |
| 3384073 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 42.0 | 3.53e-01 | 93.8% | 97.5% |
| 3375162 | 220.1.1.59 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH1_SSRP1-like | 0.50 | 37.0 | 2.95e-01 | 90.8% | 37.8% |