←Back to structures
SRR1747026_scaffold_22_prodigal-single.1__X__X__00121
Bact-VirSRR1747026_scaffold_22_prodigal-single.1__X__X__00121
Identity
- Kingdom:
- phage
Quality
62.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-100
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ng2A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 41.0 | 4.97e-01 | 100.0% | 95.5% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 40.0 | 3.91e-01 | 75.0% | 58.1% |
| 1hxdA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.63 | 55.0 | 4.00e-01 | 100.0% | 64.0% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 40.0 | 4.05e-01 | 75.0% | 66.7% |
| 1wqwA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 50.0 | 3.76e-01 | 100.0% | 62.6% |
| 1u3oA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 38.0 | 3.94e-01 | 75.0% | 72.6% |
| 3wewA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 40.0 | 2.83e-01 | 73.5% | 43.8% |
| 1g2bA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 41.0 | 4.34e-01 | 89.7% | 87.1% |
| 5karA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 41.0 | 2.58e-01 | 82.4% | 99.3% |
| 2ej9A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 45.0 | 3.44e-01 | 100.0% | 64.9% |
| 2l31A00 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.53 | 37.0 | 3.23e-01 | 98.5% | 45.5% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.53 | 35.0 | 3.20e-01 | 73.5% | 49.0% |
| 3uh0A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 45.0 | 3.03e-01 | 100.0% | 75.7% |
| 2vgeA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.51 | 44.0 | 3.18e-01 | 97.1% | 44.0% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 4.01e-01 | 100.0% | 97.8% |
| 1nyrA03 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 42.0 | 2.83e-01 | 100.0% | 72.2% |
| 3a32A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 42.0 | 2.78e-01 | 100.0% | 78.1% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081065 | 3761.1.1.5 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › PF26696 | 0.89 | 53.0 | 6.43e-01 | 98.5% | 91.1% |
| 165220 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.63 | 40.0 | 3.90e-01 | 73.5% | 60.3% |
| 5011186 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.62 | 36.0 | 3.79e-01 | 76.5% | 63.3% |
| 5058795 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.62 | 53.0 | 3.85e-01 | 100.0% | 61.0% |
| 2581318 | 3856.1.2.1 ↗ | beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta | 0.62 | 51.0 | 5.25e-01 | 100.0% | 92.3% |
| 3739968 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.62 | 53.0 | 3.70e-01 | 100.0% | 59.6% |
| 3330143 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.62 | 54.0 | 3.65e-01 | 100.0% | 49.2% |
| 3271184 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.61 | 53.0 | 3.73e-01 | 100.0% | 54.5% |
| 3500084 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 41.0 | 4.12e-01 | 73.5% | 68.6% |
| 4953222 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.61 | 52.0 | 3.78e-01 | 100.0% | 60.5% |
| 4982560 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.61 | 52.0 | 3.77e-01 | 100.0% | 59.5% |
| 5008475 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.60 | 52.0 | 3.85e-01 | 100.0% | 61.1% |
| 3831339 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.60 | 52.0 | 3.54e-01 | 100.0% | 48.7% |
| 5074615 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.60 | 51.0 | 3.68e-01 | 100.0% | 57.7% |
| 4939303 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.60 | 51.0 | 3.69e-01 | 100.0% | 59.0% |
| 7027 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.59 | 50.0 | 3.77e-01 | 100.0% | 62.2% |
| 5014205 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.59 | 49.0 | 3.81e-01 | 100.0% | 70.7% |
| 4927384 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.59 | 49.0 | 3.59e-01 | 100.0% | 59.1% |
| 5010242 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.59 | 50.0 | 3.76e-01 | 100.0% | 66.5% |
| 2171566 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.58 | 51.0 | 3.66e-01 | 100.0% | 58.1% |
| 5078463 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.58 | 49.0 | 3.64e-01 | 100.0% | 64.0% |
| 5038074 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.58 | 50.0 | 3.57e-01 | 100.0% | 51.1% |
| 4978681 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.58 | 48.0 | 3.59e-01 | 100.0% | 62.0% |
| 4963110 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.57 | 47.0 | 3.58e-01 | 100.0% | 63.1% |
| 3557677 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.57 | 37.0 | 3.70e-01 | 75.0% | 64.3% |
| 3937266 | 4.1.1.414 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_LplA_LipB | 0.57 | 47.0 | 3.13e-01 | 100.0% | 39.4% |
| 4000396 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.56 | 47.0 | 3.25e-01 | 100.0% | 48.4% |
| 4981862 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.56 | 48.0 | 3.69e-01 | 100.0% | 65.9% |
| 5047867 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.56 | 46.0 | 3.45e-01 | 100.0% | 60.0% |
| 3236190 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.56 | 46.0 | 3.42e-01 | 100.0% | 62.8% |
| 4994966 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.56 | 46.0 | 3.41e-01 | 100.0% | 54.9% |
| 3642328 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 40.0 | 4.37e-01 | 88.2% | 94.5% |
| 3608890 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.56 | 47.0 | 3.33e-01 | 100.0% | 52.1% |
| 5071208 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.56 | 39.0 | 3.50e-01 | 76.5% | 90.5% |
| 5017466 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.55 | 46.0 | 3.37e-01 | 100.0% | 55.0% |
| 3603956 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.55 | 46.0 | 3.29e-01 | 100.0% | 51.9% |
| 3260561 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.55 | 38.0 | 3.40e-01 | 73.5% | 69.0% |
| 3579362 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.55 | 41.0 | 3.56e-01 | 100.0% | 50.9% |
| 3386233 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.54 | 45.0 | 3.50e-01 | 100.0% | 69.7% |
| 158834 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.52 | 39.0 | 3.23e-01 | 83.8% | 47.0% |
| 4299924 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.52 | 44.0 | 2.92e-01 | 100.0% | 72.2% |
| 3597430 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.51 | 35.0 | 3.20e-01 | 72.1% | 67.0% |
| 3619980 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 42.0 | 3.62e-01 | 92.6% | 97.3% |
| 3894482 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.51 | 42.0 | 2.92e-01 | 100.0% | 68.0% |
| 4658842 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.50 | 42.0 | 2.81e-01 | 100.0% | 77.8% |
| 3689239 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.50 | 33.0 | 3.16e-01 | 95.6% | 55.3% |
D2
medium
residues 107-167