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SRR1747026_scaffold_22_prodigal-single.1__X__X__00184
Bact-VirSRR1747026_scaffold_22_prodigal-single.1__X__X__00184
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-133
Domain cluster:
rep: OK896991.1__UDY80742.1__X__00073__D5-103
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02452.24 best | PemK_toxin | 26.4 | 9.10e-06 | 96.1% | 91.7% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5uctB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 73.0 | 7.41e-01 | 95.1% | 92.0% |
| 5hk0B00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 79.0 | 7.85e-01 | 100.0% | 94.4% |
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 80.0 | 7.66e-01 | 100.0% | 92.2% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 42.0 | 5.23e-01 | 85.4% | 81.2% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 73.0 | 7.28e-01 | 97.1% | 95.2% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 51.0 | 6.03e-01 | 87.4% | 94.4% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 65.0 | 6.71e-01 | 96.1% | 92.7% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 43.0 | 5.40e-01 | 84.5% | 88.9% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 43.0 | 5.03e-01 | 82.5% | 78.9% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 47.0 | 4.10e-01 | 86.4% | 46.4% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.70 | 43.0 | 4.29e-01 | 84.5% | 59.6% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 46.0 | 5.33e-01 | 86.4% | 94.5% |
| 3e1sA04 | 2.30.30.940 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 40.0 | 4.83e-01 | 85.4% | 89.9% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.66 | 42.0 | 5.02e-01 | 87.4% | 98.5% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.65 | 38.0 | 4.79e-01 | 86.4% | 100.0% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 39.0 | 3.70e-01 | 82.5% | 52.1% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 38.0 | 4.62e-01 | 81.6% | 100.0% |
| 2as9B01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 33.0 | 3.35e-01 | 85.4% | 56.4% |
| 2gs5A01 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.55 | 46.0 | 3.79e-01 | 92.2% | 81.9% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 38.0 | 3.40e-01 | 79.6% | 86.0% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5027789 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.93 | 82.0 | 8.39e-01 | 98.1% | 95.0% |
| 5012680 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.90 | 84.0 | 8.20e-01 | 98.1% | 95.5% |
| 3955085 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.87 | 78.0 | 7.95e-01 | 97.1% | 96.0% |
| 3959465 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.87 | 82.0 | 7.49e-01 | 100.0% | 80.0% |
| 4645229 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.86 | 80.0 | 7.89e-01 | 97.1% | 92.7% |
| 3619619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 50.0 | 6.03e-01 | 85.4% | 85.7% |
| 4667326 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.86 | 80.0 | 7.71e-01 | 98.1% | 92.2% |
| 1109151 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.85 | 81.0 | 7.60e-01 | 100.0% | 89.2% |
| 1952922 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.85 | 81.0 | 7.91e-01 | 100.0% | 94.5% |
| 5065801 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.84 | 77.0 | 7.64e-01 | 98.1% | 94.3% |
| 4928262 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.84 | 79.0 | 7.72e-01 | 100.0% | 96.4% |
| 3290347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 72.0 | 7.39e-01 | 97.1% | 93.9% |
| 3601070 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 52.0 | 6.47e-01 | 84.5% | 100.0% |
| 4950603 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.83 | 78.0 | 7.46e-01 | 100.0% | 93.0% |
| 2507392 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.82 | 75.0 | 7.30e-01 | 100.0% | 89.3% |
| 4938225 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.81 | 74.0 | 7.38e-01 | 97.1% | 95.2% |
| 3595833 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.81 | 57.0 | 5.94e-01 | 92.2% | 78.9% |
| 4016602 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.80 | 75.0 | 6.62e-01 | 100.0% | 95.8% |
| 3514556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 47.0 | 5.61e-01 | 85.4% | 85.7% |
| 4961922 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 74.0 | 7.24e-01 | 98.1% | 93.6% |
| 3589640 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.80 | 75.0 | 7.38e-01 | 100.0% | 96.4% |
| 3928136 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 45.0 | 5.92e-01 | 85.4% | 100.0% |
| 3595169 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 51.0 | 6.13e-01 | 85.4% | 98.6% |
| 3841414 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.77 | 46.0 | 5.47e-01 | 85.4% | 87.1% |
| 3709279 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 55.0 | 5.88e-01 | 93.2% | 84.4% |
| 3368864 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.77 | 46.0 | 5.72e-01 | 85.4% | 95.4% |
| 3333322 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.76 | 46.0 | 4.17e-01 | 86.4% | 46.7% |
| 165654 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.74 | 50.0 | 5.79e-01 | 90.3% | 94.6% |
| 3185321 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.74 | 50.0 | 5.79e-01 | 87.4% | 94.7% |
| 4022025 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.74 | 50.0 | 4.45e-01 | 87.4% | 49.7% |
| 3927795 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 43.0 | 5.52e-01 | 83.5% | 100.0% |
| 3932484 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 44.0 | 5.51e-01 | 85.4% | 98.4% |
| 3504834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 39.0 | 5.18e-01 | 84.5% | 96.6% |
| 3553983 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.71 | 41.0 | 5.25e-01 | 86.4% | 98.3% |
| 3930643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 41.0 | 5.26e-01 | 86.4% | 100.0% |
| 3703933 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.70 | 43.0 | 5.37e-01 | 84.5% | 98.5% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.70 | 40.0 | 5.18e-01 | 86.4% | 100.0% |
| 3494683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 42.0 | 5.07e-01 | 85.4% | 90.0% |
| 1503651 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.69 | 41.0 | 4.58e-01 | 86.4% | 76.2% |
| 4024240 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 45.0 | 5.01e-01 | 86.4% | 85.0% |
| 3675653 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.68 | 47.0 | 5.48e-01 | 86.4% | 97.3% |
| 4210485 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.67 | 41.0 | 4.94e-01 | 89.3% | 96.9% |
| 4069560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 45.0 | 5.11e-01 | 87.4% | 94.7% |
| 3941170 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.66 | 42.0 | 5.01e-01 | 84.5% | 94.3% |
| 3924375 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.66 | 43.0 | 4.96e-01 | 85.4% | 90.7% |
| 3689576 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 60.0 | 5.21e-01 | 100.0% | 80.0% |
| 3925589 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 43.0 | 5.20e-01 | 85.4% | 100.0% |
| 4251101 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 44.0 | 4.76e-01 | 87.4% | 83.5% |
| 3342793 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 45.0 | 3.59e-01 | 86.4% | 38.4% |
| 3357709 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 45.0 | 4.92e-01 | 86.4% | 87.1% |
| 3890362 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 36.0 | 4.32e-01 | 73.8% | 87.1% |
| 3459099 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.61 | 51.0 | 5.15e-01 | 96.1% | 88.6% |
| 3808601 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 47.0 | 5.18e-01 | 88.3% | 100.0% |
| 3363448 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.60 | 45.0 | 4.95e-01 | 86.4% | 95.3% |
| 3645395 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.60 | 44.0 | 4.94e-01 | 84.5% | 98.8% |
| 4283343 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.59 | 42.0 | 4.73e-01 | 87.4% | 96.2% |
| 3356605 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.59 | 44.0 | 4.74e-01 | 86.4% | 88.9% |
| 3296140 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.59 | 53.0 | 3.38e-01 | 96.1% | 22.0% |
| 3807651 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.59 | 51.0 | 5.06e-01 | 96.1% | 88.2% |
| 3268160 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 4.71e-01 | 87.4% | 88.9% |
| 3201878 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 52.0 | 4.69e-01 | 96.1% | 92.9% |
| 3834112 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.59 | 43.0 | 4.81e-01 | 83.5% | 98.8% |
| 3342814 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 44.0 | 4.60e-01 | 86.4% | 86.3% |
| 3310575 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.58 | 50.0 | 4.97e-01 | 93.2% | 90.5% |
| 3719783 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 43.0 | 4.53e-01 | 87.4% | 87.2% |
| 3370374 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.56 | 50.0 | 4.57e-01 | 96.1% | 77.8% |
| 3339162 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.55 | 50.0 | 4.61e-01 | 97.1% | 78.5% |
| 3357239 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.55 | 45.0 | 3.87e-01 | 86.4% | 75.3% |
| 3242587 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.54 | 33.0 | 3.41e-01 | 74.8% | 63.2% |
| 3188712 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.54 | 43.0 | 4.42e-01 | 85.4% | 87.0% |
| 3627869 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.54 | 47.0 | 4.04e-01 | 92.2% | 72.9% |
| 3182025 | 4.1.1.475 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26640 | 0.52 | 43.0 | 3.98e-01 | 93.2% | 70.4% |
| 3278698 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 4.08e-01 | 85.4% | 93.3% |