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SRR1747026_scaffold_22_prodigal-single.1__X__X__00214
Bact-VirSRR1747026_scaffold_22_prodigal-single.1__X__X__00214
Identity
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-98
Domain cluster:
rep: pig_ID_3630_F33_scaffold_4_curated_closed_complete_prodigal-single.1__X__X__00058__D9-90
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 48.0 | 6.01e-01 | 74.7% | 98.3% |
| 2wfwA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 47.0 | 5.91e-01 | 78.9% | 100.0% |
| 2dgyA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 50.0 | 5.52e-01 | 74.7% | 82.3% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 50.0 | 5.88e-01 | 78.9% | 97.0% |
| 3zjyC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 53.0 | 5.94e-01 | 96.8% | 94.6% |
| 3qr8A01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.73 | 54.0 | 5.74e-01 | 80.0% | 86.9% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 49.0 | 5.56e-01 | 75.8% | 90.4% |
| 2ja9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 51.0 | 5.49e-01 | 77.9% | 100.0% |
| 3k0yA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.68 | 45.0 | 5.28e-01 | 75.8% | 100.0% |
| 4rg1A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 42.0 | 4.90e-01 | 74.7% | 92.3% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.66 | 37.0 | 4.61e-01 | 72.6% | 91.4% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 32.0 | 3.74e-01 | 76.8% | 65.6% |
| 4pofA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 47.0 | 4.60e-01 | 78.9% | 85.6% |
| 6nhxA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 57.0 | 5.32e-01 | 98.9% | 98.3% |
| 2id0A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 41.0 | 4.38e-01 | 77.9% | 79.5% |
| 1eovA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 46.0 | 4.17e-01 | 78.9% | 68.7% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 49.0 | 4.62e-01 | 85.3% | 77.6% |
| 3q8dA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 45.0 | 4.86e-01 | 76.8% | 96.1% |
| 3nqiA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.61 | 40.0 | 4.57e-01 | 75.8% | 96.9% |
| 2l55A00 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.61 | 48.0 | 5.10e-01 | 89.5% | 98.8% |
| 1ng2A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 29.0 | 3.91e-01 | 75.8% | 100.0% |
| 4pmwA02 | 2.40.50.700 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 45.0 | 4.89e-01 | 90.5% | 98.7% |
| 2qcpX01 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.59 | 44.0 | 4.77e-01 | 78.9% | 100.0% |
| 1go3E01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 50.0 | 5.03e-01 | 90.5% | 93.6% |
| 6lbrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 51.0 | 4.08e-01 | 98.9% | 66.5% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 47.0 | 4.56e-01 | 98.9% | 79.2% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 49.0 | 4.84e-01 | 100.0% | 87.3% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 48.0 | 4.60e-01 | 92.6% | 78.9% |
| 1uapA00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 49.0 | 4.48e-01 | 100.0% | 78.6% |
| 1jb3A00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 49.0 | 4.47e-01 | 100.0% | 90.6% |
| 6lbtA01 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 40.0 | 3.53e-01 | 76.8% | 71.8% |
| 2x5rA01 | 3.30.470.40 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.53 | 40.0 | 3.83e-01 | 82.1% | 81.7% |
| 1b3qA04 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.53 | 34.0 | 3.97e-01 | 73.7% | 100.0% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995814 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.84 | 62.0 | 5.13e-01 | 76.8% | 52.5% |
| 3980538 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.81 | 61.0 | 6.87e-01 | 78.9% | 100.0% |
| 5071570 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 51.0 | 5.48e-01 | 76.8% | 85.0% |
| 3840116 | 2.1.1.172 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNR_OB1_NT | 0.73 | 47.0 | 4.53e-01 | 75.8% | 59.0% |
| 379851 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.72 | 51.0 | 5.78e-01 | 74.7% | 98.6% |
| 4032024 | 2.1.1.335 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29902 | 0.72 | 52.0 | 5.27e-01 | 75.8% | 91.6% |
| 4606649 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 49.0 | 5.68e-01 | 74.7% | 98.5% |
| 5043072 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 43.0 | 4.90e-01 | 96.8% | 85.7% |
| 4970996 | 2.1.1.21 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Methyltrn_RNA_3 | 0.68 | 46.0 | 4.95e-01 | 96.8% | 81.2% |
| 3475071 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.68 | 49.0 | 4.89e-01 | 75.8% | 96.0% |
| 4000394 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 45.0 | 5.13e-01 | 80.0% | 97.1% |
| 3834903 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.64 | 48.0 | 4.70e-01 | 76.8% | 76.0% |
| 4625119 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.64 | 47.0 | 4.87e-01 | 76.8% | 85.4% |
| 3707903 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.64 | 47.0 | 3.75e-01 | 76.8% | 42.2% |
| 4129194 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.63 | 47.0 | 5.01e-01 | 77.9% | 97.5% |
| 4600806 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.63 | 46.0 | 4.41e-01 | 76.8% | 69.1% |
| 160765 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 34.0 | 3.77e-01 | 81.1% | 66.2% |
| 146269 | 2.18.1.0 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins | 0.62 | 42.0 | 4.76e-01 | 78.9% | 98.5% |
| 4141240 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.62 | 46.0 | 4.93e-01 | 77.9% | 93.8% |
| 4131660 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.62 | 45.0 | 4.80e-01 | 77.9% | 90.0% |
| 4683474 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.61 | 45.0 | 4.84e-01 | 77.9% | 93.8% |
| 3273860 | 2.1.1.86 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 | 0.61 | 50.0 | 5.20e-01 | 100.0% | 94.4% |
| 3071227 | 2.1.1.55 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CusF_Ec | 0.61 | 45.0 | 4.45e-01 | 77.9% | 75.0% |
| 4194126 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.61 | 45.0 | 4.86e-01 | 78.9% | 93.8% |
| 4105153 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.61 | 45.0 | 4.68e-01 | 77.9% | 91.8% |
| 4070256 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.61 | 45.0 | 4.84e-01 | 78.9% | 96.2% |
| 5028838 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 45.0 | 4.75e-01 | 80.0% | 100.0% |
| 3414245 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 47.0 | 5.11e-01 | 85.3% | 98.8% |
| 4204456 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.60 | 44.0 | 4.69e-01 | 76.8% | 96.2% |
| 4221404 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.60 | 44.0 | 4.74e-01 | 78.9% | 95.0% |
| 4208913 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 44.0 | 4.74e-01 | 78.9% | 95.0% |
| 4085660 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 44.0 | 4.76e-01 | 78.9% | 93.8% |
| 4061669 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 44.0 | 4.74e-01 | 78.9% | 95.0% |
| 4347147 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 44.0 | 4.70e-01 | 78.9% | 93.8% |
| 4183023 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 44.0 | 4.69e-01 | 78.9% | 96.2% |
| 4209293 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 44.0 | 4.66e-01 | 78.9% | 95.0% |
| 4072975 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 44.0 | 4.73e-01 | 78.9% | 93.8% |
| 3963029 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 43.0 | 4.53e-01 | 76.8% | 94.1% |
| 3953289 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 44.0 | 4.59e-01 | 78.9% | 88.2% |
| 4990774 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 42.0 | 4.05e-01 | 75.8% | 100.0% |
| 3430247 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.58 | 46.0 | 4.52e-01 | 94.7% | 78.8% |
| 143318 | 2.1.1.114 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › AceES-2 | 0.58 | 47.0 | 4.56e-01 | 98.9% | 79.2% |
| 3719891 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.57 | 51.0 | 4.83e-01 | 100.0% | 81.7% |
| 3593985 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 51.0 | 4.88e-01 | 100.0% | 85.5% |
| 4943610 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.57 | 41.0 | 3.73e-01 | 75.8% | 98.4% |
| 3402269 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.56 | 48.0 | 4.55e-01 | 91.6% | 86.4% |
| 3508956 | 5.1.3.158 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_HCF | 0.55 | 38.0 | 2.58e-01 | 71.6% | 50.7% |
| 175113 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.53 | 47.0 | 4.11e-01 | 100.0% | 81.5% |
| 3510880 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.51 | 42.0 | 3.05e-01 | 94.7% | 59.0% |
D2
high
residues 111-190
Domain cluster:
rep: OQ508957.1__WGH49886.1__X__00170__D90-154
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.86 | 62.0 | 7.03e-01 | 81.2% | 100.0% |
| 2wcoA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.75 | 52.0 | 4.54e-01 | 71.2% | 97.4% |
| 2o4vA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.75 | 59.0 | 3.67e-01 | 83.7% | 48.9% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.72 | 50.0 | 4.51e-01 | 72.5% | 53.3% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.72 | 52.0 | 4.51e-01 | 76.2% | 50.8% |
| 1cb8A03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.72 | 49.0 | 4.39e-01 | 70.0% | 94.5% |
| 1rwhA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.72 | 49.0 | 4.33e-01 | 70.0% | 97.4% |
| 1x1iA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.71 | 49.0 | 4.32e-01 | 71.2% | 97.5% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.71 | 57.0 | 4.87e-01 | 86.3% | 86.6% |
| 1wthA02 | 3.10.450.190 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 52.0 | 4.78e-01 | 77.5% | 89.2% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.70 | 57.0 | 4.56e-01 | 87.5% | 51.0% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 55.0 | 4.48e-01 | 95.0% | 88.2% |
| 4by2B00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.64 | 57.0 | 4.62e-01 | 100.0% | 83.2% |
| 2x1cB01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.63 | 51.0 | 3.52e-01 | 88.7% | 67.4% |
| 2ntkB00 | 3.60.20.20 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like | 0.63 | 53.0 | 3.99e-01 | 93.8% | 65.8% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 53.0 | 4.43e-01 | 95.0% | 87.1% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.62 | 54.0 | 3.95e-01 | 98.8% | 73.9% |
| 2ixaA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.61 | 50.0 | 3.63e-01 | 92.5% | 77.4% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.61 | 53.0 | 4.08e-01 | 98.8% | 90.4% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.60 | 48.0 | 4.19e-01 | 87.5% | 55.6% |
| 2r1bA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 42.0 | 3.11e-01 | 72.5% | 39.9% |
| 3cwxA00 | 3.40.1420.20 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD | 0.59 | 48.0 | 4.14e-01 | 88.7% | 98.4% |
| 1nkgA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 51.0 | 3.59e-01 | 96.2% | 83.3% |
| 7xr9E01 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 48.0 | 3.74e-01 | 92.5% | 59.9% |
| 5iqaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 42.0 | 4.06e-01 | 76.2% | 90.0% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 49.0 | 4.23e-01 | 95.0% | 61.6% |
| 3e9mB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 45.0 | 3.55e-01 | 93.8% | 44.9% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 43.0 | 4.14e-01 | 80.0% | 89.9% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 46.0 | 3.93e-01 | 92.5% | 59.0% |
| 4csdB00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.55 | 41.0 | 2.95e-01 | 81.2% | 65.2% |
| 1ealA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 4.06e-01 | 95.0% | 61.4% |
| 2rcqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 46.0 | 3.88e-01 | 93.8% | 58.2% |
| 2wjsA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 41.0 | 3.23e-01 | 80.0% | 65.7% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.55 | 42.0 | 3.56e-01 | 86.3% | 69.9% |
| 2i44B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.55 | 39.0 | 2.69e-01 | 76.2% | 67.7% |
| 3vm7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 41.0 | 3.81e-01 | 78.8% | 94.9% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 45.0 | 3.92e-01 | 93.8% | 59.8% |
| 6ctzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 41.0 | 3.91e-01 | 80.0% | 91.4% |
| 3asiA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 3.20e-01 | 82.5% | 59.0% |
| 4iq0C02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 42.0 | 3.41e-01 | 93.8% | 49.2% |
| 1s4uX00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 2.97e-01 | 100.0% | 56.7% |
| 3afcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 2.73e-01 | 96.2% | 35.8% |
| 2ojhA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 41.0 | 2.99e-01 | 96.2% | 60.6% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.94e-01 | 100.0% | 61.9% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 37.0 | 3.53e-01 | 76.2% | 93.4% |
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.50 | 34.0 | 3.79e-01 | 93.8% | 93.4% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3256681 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.80 | 62.0 | 3.95e-01 | 85.0% | 18.1% |
| 5014023 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.74 | 53.0 | 3.99e-01 | 73.8% | 93.5% |
| 5051984 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.74 | 50.0 | 4.36e-01 | 70.0% | 49.2% |
| 3256679 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.73 | 49.0 | 5.12e-01 | 70.0% | 100.0% |
| 3470631 | 292.2.1.3 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 | 0.72 | 52.0 | 4.39e-01 | 75.0% | 55.4% |
| 3928477 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.70 | 57.0 | 4.25e-01 | 87.5% | 38.5% |
| 3912697 | 292.2.1.3 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 | 0.70 | 52.0 | 4.61e-01 | 81.2% | 56.4% |
| 356532 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.70 | 53.0 | 3.81e-01 | 80.0% | 35.9% |
| 3617898 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.69 | 63.0 | 5.11e-01 | 100.0% | 93.8% |
| 3875597 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.69 | 60.0 | 3.81e-01 | 96.2% | 36.2% |
| 3764875 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.68 | 55.0 | 4.15e-01 | 87.5% | 47.4% |
| 1275015 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.68 | 51.0 | 4.71e-01 | 80.0% | 62.7% |
| 3993048 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.67 | 48.0 | 4.35e-01 | 77.5% | 54.5% |
| 3246494 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.67 | 53.0 | 3.69e-01 | 83.7% | 63.3% |
| 4203743 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.67 | 53.0 | 4.38e-01 | 86.3% | 95.9% |
| 5043213 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.67 | 48.0 | 3.55e-01 | 75.0% | 97.0% |
| 3931562 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.66 | 55.0 | 3.93e-01 | 88.7% | 69.8% |
| 3727865 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.66 | 53.0 | 3.91e-01 | 87.5% | 49.8% |
| 3604107 | 210.1.1.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › IMP_cyclohyd | 0.66 | 55.0 | 4.19e-01 | 93.8% | 65.5% |
| 4937593 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.66 | 46.0 | 3.37e-01 | 73.8% | 95.0% |
| 4954483 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.64 | 45.0 | 3.84e-01 | 72.5% | 95.2% |
| 4649120 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.63 | 45.0 | 3.07e-01 | 73.8% | 81.8% |
| 3430637 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.63 | 43.0 | 2.83e-01 | 70.0% | 31.0% |
| 3711004 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.62 | 56.0 | 4.83e-01 | 100.0% | 81.6% |
| 1309460 | 3338.1.1.1 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Fragilysin-3 prodomain › Fragilysin-3 prodomain › fragilysinNterm | 0.62 | 53.0 | 4.39e-01 | 95.0% | 84.6% |
| 3471142 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.62 | 56.0 | 4.21e-01 | 100.0% | 56.8% |
| 3878038 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.61 | 53.0 | 3.77e-01 | 96.2% | 80.8% |
| None | — | 0.61 | 54.0 | 3.27e-01 | 100.0% | 32.4% | |
| 3219544 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 42.0 | 2.87e-01 | 72.5% | 24.4% |
| 4875201 | 3338.1.1.1 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Fragilysin-3 prodomain › Fragilysin-3 prodomain › fragilysinNterm | 0.60 | 53.0 | 4.43e-01 | 98.8% | 92.0% |
| 3936855 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.60 | 51.0 | 3.68e-01 | 93.8% | 72.4% |
| 5022797 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.60 | 49.0 | 3.68e-01 | 92.5% | 77.7% |
| 3968774 | 3772.1.1.1 ↗ | beta sandwiches › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › Putative anti-sigma factor BDI_1681 N-terminal domain › FecR | 0.60 | 41.0 | 3.55e-01 | 71.2% | 83.8% |
| 3495285 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.59 | 52.0 | 4.17e-01 | 95.0% | 90.7% |
| 5051538 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.59 | 47.0 | 3.39e-01 | 92.5% | 86.2% |
| 3926705 | 6129.1.1.9 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › RGM_C | 0.58 | 51.0 | 3.96e-01 | 98.8% | 77.7% |
| 5044469 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.57 | 44.0 | 3.84e-01 | 85.0% | 66.2% |
| 3199320 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 43.0 | 3.87e-01 | 81.2% | 75.7% |
| 4215116 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 46.0 | 3.62e-01 | 91.3% | 68.3% |
| 3180248 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.54 | 44.0 | 4.14e-01 | 91.3% | 89.0% |
| 3987919 | 274.1.1.25 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF | 0.54 | 37.0 | 3.36e-01 | 76.2% | 51.8% |
| 4940665 | 9.16.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 | 0.54 | 37.0 | 3.70e-01 | 72.5% | 91.5% |
| 3894563 | 9.1.1.24 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 | 0.53 | 45.0 | 3.88e-01 | 93.8% | 59.4% |
| 3431244 | 5.1.4.122 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 | 0.53 | 41.0 | 2.77e-01 | 85.0% | 72.9% |
| 3931300 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 39.0 | 3.79e-01 | 78.8% | 72.2% |
| 3241852 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 41.0 | 3.62e-01 | 83.7% | 76.5% |
| 5059088 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 44.0 | 3.12e-01 | 100.0% | 62.4% |
| 3432384 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 37.0 | 3.18e-01 | 73.8% | 71.9% |
| 3556710 | 9.1.1.24 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 | 0.52 | 43.0 | 3.77e-01 | 93.8% | 60.2% |
| 5065294 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.52 | 44.0 | 3.48e-01 | 95.0% | 52.4% |
| 3268245 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 42.0 | 3.91e-01 | 87.5% | 89.0% |