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SRR1747026_scaffold_22_prodigal-single.1__X__X__00216
Bact-VirSRR1747026_scaffold_22_prodigal-single.1__X__X__00216
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-101
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.78 | 60.0 | 5.55e-01 | 91.7% | 64.9% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.77 | 56.0 | 6.03e-01 | 86.7% | 95.9% |
| 4bouA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.66 | 45.0 | 3.46e-01 | 71.7% | 52.5% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.54 | 39.0 | 3.84e-01 | 90.0% | 72.7% |
| 7fj9B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 41.0 | 3.14e-01 | 90.0% | 50.3% |
| 1kw4A00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.52 | 38.0 | 3.70e-01 | 100.0% | 70.0% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 41.0 | 3.13e-01 | 91.7% | 67.3% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 41.0 | 2.98e-01 | 93.3% | 42.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.91 | 83.0 | 7.89e-01 | 100.0% | 87.1% |
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 72.0 | 7.47e-01 | 90.0% | 94.5% |
| 3955076 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 63.0 | 7.12e-01 | 78.3% | 100.0% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 67.0 | 7.00e-01 | 90.0% | 94.5% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 66.0 | 6.85e-01 | 95.0% | 94.5% |
| 3422876 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.68 | 55.0 | 5.57e-01 | 98.3% | 91.7% |
| 3732360 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.67 | 45.0 | 3.26e-01 | 71.7% | 52.2% |
| 2429116 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.57 | 41.0 | 3.11e-01 | 78.3% | 60.9% |
| 4993795 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.56 | 42.0 | 3.73e-01 | 85.0% | 94.7% |
| 4996508 | 243.6.1.5 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › UPF0113_N | 0.55 | 42.0 | 3.68e-01 | 88.3% | 92.0% |
| 4992194 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.54 | 42.0 | 3.79e-01 | 90.0% | 94.4% |
| 4683341 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.54 | 43.0 | 3.08e-01 | 93.3% | 41.5% |