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SRR1747027_scaffold_2_prodigal-single.1__X__X__00010
Bact-VirSRR1747027_scaffold_2_prodigal-single.1__X__X__00010
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-195
Domain cluster:
rep: pre4_saliva_scaffold_3_prodigal-single.1__X__X__00167__D2-182
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01510.31 best | Amidase_2 | 43.3 | 6.30e-11 | 79.3% | 90.7% |
D2
high
residues 225-279
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qjfB01 | 6.10.140.10 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 40.0 | 4.05e-01 | 89.1% | 61.1% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 42.0 | 4.15e-01 | 70.9% | 67.2% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 41.0 | 4.05e-01 | 70.9% | 82.8% |
| 2l37A00 | 6.10.250.890 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 40.0 | 4.45e-01 | 70.9% | 90.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3746144 | 192.29.1.273 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › NICE-3 | 0.70 | 54.0 | 5.16e-01 | 83.6% | 100.0% |
| 4142579 | 3718.1.1.26 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › RICH | 0.53 | 46.0 | 3.72e-01 | 94.5% | 71.0% |
| 3939938 | 103.4.1.1 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX | 0.53 | 48.0 | 4.12e-01 | 100.0% | 87.1% |
| None | — | 0.52 | 43.0 | 2.62e-01 | 92.7% | 94.3% |