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SRR1747027_scaffold_2_prodigal-single.1__X__X__00039
Bact-VirSRR1747027_scaffold_2_prodigal-single.1__X__X__00039
Identity
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-142
D2
high
residues 143-211
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vwaA00 | 1.20.58.1330 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein | 0.66 | 53.0 | 4.68e-01 | 87.0% | 91.9% |
| 2l5qA02 | 1.10.10.1650 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 47.0 | 4.30e-01 | 76.8% | 58.7% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.58 | 39.0 | 3.82e-01 | 91.3% | 64.0% |
| 4rg8A04 | 1.10.287.1240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 36.0 | 3.82e-01 | 91.3% | 72.6% |
| 2ogjA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.57 | 43.0 | 2.97e-01 | 84.1% | 57.6% |
| 2guzA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.55 | 36.0 | 3.58e-01 | 87.0% | 63.4% |
| 4uw9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 47.0 | 4.45e-01 | 95.7% | 85.5% |
| 4eekA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 34.0 | 3.53e-01 | 81.2% | 65.2% |
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 30.0 | 3.43e-01 | 88.4% | 75.0% |
| 2p9bA04 | 1.20.58.520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Amidohydrolase | 0.54 | 38.0 | 3.54e-01 | 76.8% | 56.5% |
| 1ywqA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.54 | 38.0 | 2.80e-01 | 75.4% | 49.2% |
| 2hcfA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 38.0 | 3.97e-01 | 76.8% | 98.5% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.52 | 40.0 | 3.60e-01 | 84.1% | 63.6% |
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.52 | 37.0 | 3.22e-01 | 75.4% | 49.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3403505 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 44.0 | 4.31e-01 | 78.3% | 65.3% |
| 4603339 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 42.0 | 3.90e-01 | 76.8% | 66.7% |
| 3999246 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.59 | 44.0 | 3.85e-01 | 81.2% | 81.0% |
| 4168740 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.56 | 40.0 | 3.01e-01 | 75.4% | 49.4% |
| 4018469 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 3.57e-01 | 76.8% | 50.5% |
| 3593355 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.55 | 46.0 | 4.15e-01 | 92.8% | 67.4% |
| 3738945 | 509.1.1.9 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH_ZNF598 | 0.55 | 45.0 | 4.26e-01 | 94.2% | 75.3% |
| 4010984 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 40.0 | 2.94e-01 | 81.2% | 76.9% |
| 4011370 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.54 | 46.0 | 4.16e-01 | 95.7% | 69.5% |
| 3201265 | 509.1.1.9 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH_ZNF598 | 0.51 | 45.0 | 4.03e-01 | 100.0% | 72.0% |