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SRR1747027_scaffold_2_prodigal-single.1__X__X__00151
Bact-VirSRR1747027_scaffold_2_prodigal-single.1__X__X__00151
Identity
- Kingdom:
- phage
Quality
64.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 62-203
Domain cluster:
rep: SRR1747021_scaffold_4_curated_closed_complete_prodigal-single.1__X__X__00084__D39-151
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 27.0 | 3.56e-01 | 94.4% | 81.6% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 31.0 | 3.51e-01 | 100.0% | 67.6% |
| 1t3yA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 35.0 | 3.70e-01 | 85.9% | 64.9% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 31.0 | 3.55e-01 | 100.0% | 69.2% |
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.55 | 37.0 | 4.00e-01 | 86.6% | 82.9% |
| 1uwdA00 | 3.30.300.130 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Fe-S cluster assembly (FSCA) | 0.54 | 30.0 | 3.40e-01 | 100.0% | 72.5% |
| 1hh2P03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 28.0 | 3.48e-01 | 99.3% | 89.9% |
| 4dcuA03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 28.0 | 3.54e-01 | 99.3% | 91.5% |
| 1egaA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 34.0 | 3.90e-01 | 100.0% | 92.5% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956973 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.63 | 43.0 | 3.66e-01 | 96.5% | 42.6% |
| 4935175 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.62 | 30.0 | 4.09e-01 | 99.3% | 95.4% |
| 3496292 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 20.0 | 3.18e-01 | 96.5% | 72.7% |
| 5039350 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.61 | 33.0 | 3.88e-01 | 99.3% | 74.0% |
| 3264034 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.61 | 26.0 | 3.74e-01 | 89.4% | 87.7% |
| 4947808 | 304.25.1.11 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › Peptidase_M20 | 0.60 | 33.0 | 3.69e-01 | 100.0% | 68.2% |
| 3592961 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.60 | 35.0 | 4.02e-01 | 99.3% | 78.8% |
| 4025837 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.59 | 36.0 | 4.30e-01 | 99.3% | 89.5% |
| 3313182 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.59 | 26.0 | 3.61e-01 | 90.8% | 82.9% |
| 4965450 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 32.0 | 3.53e-01 | 100.0% | 65.5% |
| 4047480 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.59 | 35.0 | 3.92e-01 | 99.3% | 73.9% |
| 4215835 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 35.0 | 4.08e-01 | 99.3% | 82.5% |
| 4163056 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 35.0 | 3.82e-01 | 99.3% | 70.8% |
| 4134430 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 35.0 | 3.82e-01 | 99.3% | 70.8% |
| 3514947 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 35.0 | 4.13e-01 | 99.3% | 85.9% |
| 2984821 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.58 | 35.0 | 4.19e-01 | 99.3% | 89.5% |
| 3941514 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 35.0 | 3.78e-01 | 99.3% | 70.8% |
| 4312446 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 35.0 | 3.92e-01 | 99.3% | 77.3% |
| 3371599 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.58 | 35.0 | 4.02e-01 | 99.3% | 84.0% |
| 5074648 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 29.0 | 3.74e-01 | 95.8% | 88.0% |
| 4951187 | 327.11.1.7 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd | 0.57 | 27.0 | 3.72e-01 | 99.3% | 93.8% |
| 3743715 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.57 | 29.0 | 3.66e-01 | 99.3% | 83.7% |
| 4431988 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.57 | 34.0 | 3.93e-01 | 99.3% | 81.0% |
| 5075567 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.57 | 31.0 | 3.50e-01 | 100.0% | 68.2% |
| 4233591 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.56 | 31.0 | 3.81e-01 | 99.3% | 87.1% |
| 3385859 | 327.6.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › NifU | 0.56 | 31.0 | 3.68e-01 | 99.3% | 81.8% |
| 3294828 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.56 | 35.0 | 3.73e-01 | 99.3% | 71.7% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.56 | 28.0 | 3.73e-01 | 96.5% | 94.3% |
| 4165557 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.56 | 34.0 | 3.67e-01 | 99.3% | 70.8% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 28.0 | 3.61e-01 | 95.8% | 88.0% |
| 4955282 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.55 | 27.0 | 3.50e-01 | 99.3% | 85.3% |
| 5055629 | 3604.1.1.0 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain | 0.55 | 25.0 | 3.54e-01 | 85.2% | 96.7% |
| 5048258 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.54 | 29.0 | 3.74e-01 | 99.3% | 94.7% |
| 5000076 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.54 | 32.0 | 3.54e-01 | 99.3% | 71.3% |
| 3621347 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.54 | 32.0 | 3.48e-01 | 87.3% | 68.3% |
| 4001734 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.54 | 31.0 | 3.38e-01 | 85.2% | 67.8% |
| 4055397 | 327.9.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Probable GTPase Der, C-terminal domain › Probable GTPase Der, C-terminal domain › KH_dom-like | 0.53 | 29.0 | 3.49e-01 | 99.3% | 78.9% |
| 3362766 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.53 | 21.0 | 3.25e-01 | 95.1% | 98.0% |
| 3242509 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.52 | 31.0 | 3.23e-01 | 99.3% | 61.5% |
| 3394266 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.51 | 31.0 | 3.31e-01 | 87.3% | 68.3% |
| 4025662 | 327.9.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Probable GTPase Der, C-terminal domain › Probable GTPase Der, C-terminal domain › KH_dom-like | 0.51 | 28.0 | 3.49e-01 | 99.3% | 92.5% |