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SRR1747030_scaffold_3_prodigal-single.1__X__X__00001
Bact-VirSRR1747030_scaffold_3_prodigal-single.1__X__X__00001
Identity
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-69
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.63 | 44.0 | 4.08e-01 | 72.9% | 60.3% |
| 3pf6A00 | 6.10.250.2290 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 40.0 | 4.01e-01 | 74.6% | 65.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3985544 | 101.1.11.65 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RepB-RCR_reg | 0.71 | 57.0 | 5.93e-01 | 89.8% | 98.2% |
| 3330005 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.70 | 48.0 | 5.26e-01 | 76.3% | 100.0% |
| 1141967 | 3443.1.1.3 ↗ | alpha duplicates or obligate multimers › Get5 carboxyl domain › Get5 carboxyl domain › Get5 carboxyl domain › MDY2_C | 0.66 | 36.0 | 4.30e-01 | 74.6% | 80.5% |
| 3953737 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.62 | 47.0 | 3.74e-01 | 84.7% | 43.1% |
| 3807164 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.59 | 43.0 | 4.47e-01 | 84.7% | 87.3% |
| 4950862 | 518.1.1.1 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N | 0.56 | 40.0 | 3.98e-01 | 78.0% | 83.1% |
| 4009213 | 103.4.1.22 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF30394 | 0.56 | 38.0 | 3.38e-01 | 71.2% | 91.1% |
| 4957062 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 38.0 | 3.30e-01 | 71.2% | 57.8% |
| 3659143 | 564.1.1.0 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors | 0.54 | 42.0 | 3.51e-01 | 84.7% | 58.0% |
| 2139067 | 518.1.1.1 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N | 0.53 | 38.0 | 3.63e-01 | 78.0% | 81.4% |
| 4339805 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.52 | 36.0 | 2.47e-01 | 71.2% | 34.1% |
| 4928682 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.50 | 46.0 | 3.55e-01 | 100.0% | 48.8% |