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SRR1747030_scaffold_3_prodigal-single.1__X__X__00019
Bact-VirSRR1747030_scaffold_3_prodigal-single.1__X__X__00019
Identity
- Kingdom:
- phage
Quality
95.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-52
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.76 | 55.0 | 4.71e-01 | 77.6% | 50.0% |
| 4l8eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.67 | 56.0 | 4.38e-01 | 98.0% | 76.4% |
| 2i06A01 | 3.50.14.10 | Alpha Beta › 3-Layer(bba) Sandwich › Replication Terminator Protein (Tus); Chain A, domain 1 › Replication terminator Tus, domain 1 superfamily/Replication terminator Tus | 0.61 | 53.0 | 3.49e-01 | 100.0% | 90.2% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.60 | 47.0 | 3.27e-01 | 95.9% | 29.7% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 45.0 | 3.47e-01 | 93.9% | 48.1% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 45.0 | 4.55e-01 | 85.7% | 100.0% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 3.87e-01 | 83.7% | 61.9% |
| 4ielA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 45.0 | 3.63e-01 | 100.0% | 74.1% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.51 | 42.0 | 3.58e-01 | 91.8% | 68.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163613 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 55.0 | 4.86e-01 | 100.0% | 61.4% |
| 3293154 | 101.1.2.472 ↗ | alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 | 0.58 | 44.0 | 4.25e-01 | 87.8% | 75.0% |
| 4205790 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.56 | 39.0 | 3.48e-01 | 79.6% | 47.5% |
| 5040242 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.55 | 42.0 | 3.46e-01 | 87.8% | 55.2% |