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SRR1747030_scaffold_3_prodigal-single.1XX__00021

Bact-Vir

SRR1747030_scaffold_3_prodigal-single.1__X__X__00021

Identity

Kingdom:: phage

Quality

87.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-153

PDB

Domain cluster: representative

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4958339	4.11.1.1 ↗	beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24	0.71	26.0	3.06e-01	100.0%	45.5%
3587906	4.1.1.46 ↗	beta barrels › SH3 › SH3 › SH3 › VEG	0.61	26.0	3.43e-01	100.0%	72.5%
4323235	4.1.1.97 ↗	beta barrels › SH3 › SH3 › SH3 › DUF150_C	0.52	27.0	3.16e-01	100.0%	69.1%

D2 high residues 156-241

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3teqB00	1.10.287.3550	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.78	54.0	5.08e-01	70.9%	63.4%
4ixjA01	3.30.1300.80	Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 ›	0.73	44.0	4.68e-01	73.3%	67.5%
3kxeA00	3.30.2310.20	Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like	0.59	42.0	4.13e-01	74.4%	94.7%
1sg7A00	1.10.1740.70	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB	0.59	34.0	3.65e-01	72.1%	65.3%
1wj7A01	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.56	31.0	3.54e-01	77.9%	75.0%
3mgdB00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.55	40.0	3.31e-01	75.6%	77.6%
3r31A01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.55	41.0	3.09e-01	83.7%	74.3%
1dc1A01	3.40.91.10	Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease ›	0.54	44.0	3.28e-01	88.4%	84.7%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3511292	325.1.7.19 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Rrp15p	0.70	50.0	5.51e-01	89.5%	91.4%
3786078	109.4.1.1764 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917	0.68	55.0	3.37e-01	86.0%	20.2%
5041715	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.67	47.0	4.28e-01	83.7%	56.4%
4929483	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.62	53.0	4.67e-01	89.5%	80.8%
3987263	4321.1.1.3 ↗	a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › PgdA_N	0.61	42.0	3.12e-01	70.9%	37.7%
5030423	3542.1.1.2 ↗	alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › SPP	0.60	46.0	3.23e-01	81.4%	43.6%
3262615	206.1.1.49 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF5898	0.57	32.0	2.63e-01	77.9%	30.0%
4991922	3926.1.1.1 ↗	alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D	0.55	44.0	3.47e-01	89.5%	51.8%
4948719	101.1.2.28 ↗	alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B	0.51	34.0	3.32e-01	77.9%	60.0%
3754285	632.7.1.26 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Tim29	0.51	44.0	3.89e-01	97.7%	99.2%
5048181	101.1.2.819 ↗	alpha arrays › HTH › HTH › winged helix domain › PF27231	0.50	36.0	2.93e-01	76.7%	85.9%