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SRR1747030_scaffold_3_prodigal-single.1__X__X__00055
Bact-VirSRR1747030_scaffold_3_prodigal-single.1__X__X__00055
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-104
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.60 | 29.0 | 2.92e-01 | 93.7% | 43.9% |
| 1mgpA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.59 | 34.0 | 3.17e-01 | 100.0% | 44.6% |
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.59 | 40.0 | 3.91e-01 | 84.2% | 63.0% |
| 1burS00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.53 | 42.0 | 3.85e-01 | 84.2% | 65.0% |
| 2qrdE01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 41.0 | 3.37e-01 | 83.2% | 55.0% |
| 2dt8A02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.52 | 34.0 | 3.05e-01 | 100.0% | 47.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970048 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.67 | 28.0 | 3.05e-01 | 88.4% | 46.2% |
| 4257463 | 4292.1.1.1 ↗ | a+b two layers › FlaG-like › FlaG-related › FlaG-related › FlaG | 0.62 | 28.0 | 3.09e-01 | 89.5% | 52.0% |
| 4659490 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.61 | 43.0 | 4.02e-01 | 84.2% | 60.0% |
| 4883629 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.61 | 42.0 | 4.04e-01 | 84.2% | 61.1% |
| 3337910 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.59 | 47.0 | 4.64e-01 | 84.2% | 80.0% |
| 5009289 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.56 | 35.0 | 3.23e-01 | 100.0% | 46.9% |
| 4277361 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.56 | 44.0 | 3.83e-01 | 84.2% | 60.8% |
| 4978596 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.53 | 34.0 | 3.17e-01 | 76.8% | 50.4% |
| 2324048 | 1185.1.1.1 ↗ | a+b two layers › A hypothetical protein from Neisseria gonorrhoeae › A hypothetical protein from Neisseria gonorrhoeae › A hypothetical protein from Neisseria gonorrhoeae › DUF6911 | 0.52 | 46.0 | 4.09e-01 | 100.0% | 91.3% |
| 3620708 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.51 | 42.0 | 3.61e-01 | 90.5% | 80.0% |
| 4944889 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 36.0 | 2.95e-01 | 100.0% | 39.5% |