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SRR1747030_scaffold_3_prodigal-single.1__X__X__00073
Bact-VirSRR1747030_scaffold_3_prodigal-single.1__X__X__00073
Identity
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-83
Domain cluster:
rep: MZ333131.1__QXG07615.1__X__00074__D8-70
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 55.0 | 6.02e-01 | 100.0% | 83.9% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 49.0 | 5.25e-01 | 100.0% | 69.7% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 53.0 | 4.33e-01 | 100.0% | 39.8% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.78 | 65.0 | 5.82e-01 | 100.0% | 65.4% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.78 | 64.0 | 6.50e-01 | 100.0% | 89.2% |
| 1whjA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.76 | 62.0 | 5.51e-01 | 100.0% | 63.7% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.74 | 51.0 | 5.54e-01 | 100.0% | 88.7% |
| 4oelB00 | 2.40.50.170 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C | 0.67 | 45.0 | 4.72e-01 | 93.4% | 76.8% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 47.0 | 4.86e-01 | 100.0% | 80.8% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 51.0 | 4.80e-01 | 100.0% | 71.1% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 45.0 | 4.60e-01 | 100.0% | 76.0% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 42.0 | 4.72e-01 | 81.6% | 92.9% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 39.0 | 4.21e-01 | 100.0% | 75.4% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 47.0 | 3.91e-01 | 100.0% | 47.0% |
| 1jqpA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 55.0 | 3.85e-01 | 100.0% | 35.1% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.57 | 49.0 | 4.67e-01 | 100.0% | 80.0% |
| 2vgmA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.57 | 46.0 | 3.92e-01 | 100.0% | 54.9% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.57 | 44.0 | 4.44e-01 | 100.0% | 84.2% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.57 | 36.0 | 3.88e-01 | 93.4% | 77.8% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.54 | 46.0 | 3.94e-01 | 100.0% | 57.5% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 47.0 | 3.47e-01 | 100.0% | 49.0% |
| 5ixgA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.52 | 38.0 | 3.02e-01 | 80.3% | 97.6% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3214131 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 52.0 | 5.16e-01 | 100.0% | 58.7% |
| 4629735 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 55.0 | 5.90e-01 | 100.0% | 76.9% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.83 | 55.0 | 5.98e-01 | 100.0% | 80.0% |
| 3677709 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.82 | 72.0 | 7.14e-01 | 100.0% | 88.7% |
| 3533686 | 4.1.1.315 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 | 0.82 | 67.0 | 4.10e-01 | 100.0% | 16.7% |
| 3875355 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.82 | 66.0 | 4.81e-01 | 100.0% | 34.2% |
| 2527304 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.82 | 54.0 | 6.00e-01 | 100.0% | 85.2% |
| 3768116 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.80 | 54.0 | 3.82e-01 | 100.0% | 24.7% |
| 4012945 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 65.0 | 6.57e-01 | 100.0% | 86.7% |
| 3487371 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.79 | 63.0 | 5.81e-01 | 100.0% | 67.4% |
| 3470175 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.79 | 65.0 | 6.37e-01 | 100.0% | 82.5% |
| 4427477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 53.0 | 4.90e-01 | 100.0% | 55.8% |
| 3511007 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.78 | 56.0 | 4.77e-01 | 100.0% | 47.5% |
| 3423859 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 72.0 | 6.73e-01 | 100.0% | 83.3% |
| 572 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.78 | 65.0 | 5.82e-01 | 100.0% | 65.4% |
| 26065 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.78 | 63.0 | 5.50e-01 | 100.0% | 59.6% |
| 3935042 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.76 | 63.0 | 5.50e-01 | 98.7% | 60.9% |
| 3739064 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 53.0 | 5.73e-01 | 100.0% | 86.2% |
| 3553413 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.74 | 54.0 | 5.20e-01 | 100.0% | 68.2% |
| 3699364 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.73 | 61.0 | 6.19e-01 | 100.0% | 89.3% |
| 3932586 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.73 | 50.0 | 3.87e-01 | 96.1% | 33.1% |
| 3299937 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 68.0 | 6.42e-01 | 100.0% | 85.6% |
| 4519674 | 4.1.1.186 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5397 | 0.72 | 47.0 | 5.31e-01 | 100.0% | 87.9% |
| 3409335 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.72 | 67.0 | 4.86e-01 | 100.0% | 39.0% |
| 3624306 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.70 | 64.0 | 5.36e-01 | 100.0% | 62.4% |
| 3997989 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.69 | 55.0 | 5.58e-01 | 96.1% | 85.3% |
| 4171942 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.69 | 57.0 | 5.07e-01 | 100.0% | 64.4% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.67 | 55.0 | 5.71e-01 | 100.0% | 97.1% |
| 4779630 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.67 | 45.0 | 4.72e-01 | 93.4% | 76.8% |
| 3594328 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 53.0 | 5.01e-01 | 100.0% | 71.1% |
| 3784770 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.65 | 53.0 | 5.39e-01 | 100.0% | 88.0% |
| 591 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.63 | 45.0 | 4.58e-01 | 100.0% | 75.0% |
| 4250193 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.63 | 47.0 | 4.48e-01 | 100.0% | 67.8% |
| 3272197 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 49.0 | 4.37e-01 | 100.0% | 61.0% |
| 3395889 | 219.1.1.2 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 | 0.61 | 55.0 | 3.59e-01 | 100.0% | 24.7% |
| 3583921 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.60 | 51.0 | 5.32e-01 | 98.7% | 98.6% |
| 3797602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 51.0 | 5.31e-01 | 98.7% | 98.6% |
| 3803520 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 54.0 | 4.63e-01 | 100.0% | 68.3% |
| 3391656 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.59 | 53.0 | 3.52e-01 | 100.0% | 26.5% |
| 3213653 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.59 | 53.0 | 5.24e-01 | 100.0% | 92.5% |
| 3411042 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.59 | 42.0 | 4.69e-01 | 100.0% | 95.0% |
| 3912861 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.58 | 52.0 | 3.42e-01 | 100.0% | 30.6% |
| 3304525 | 4.1.1.173 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4216 | 0.58 | 54.0 | 4.68e-01 | 100.0% | 80.0% |
| 3700860 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.57 | 51.0 | 3.28e-01 | 100.0% | 32.6% |
| 4517543 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.57 | 51.0 | 4.35e-01 | 100.0% | 60.8% |
| 3328224 | 4.1.1.336 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7699 | 0.57 | 51.0 | 4.29e-01 | 100.0% | 60.0% |
| 3593299 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 50.0 | 3.22e-01 | 100.0% | 32.1% |
| 3907178 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 49.0 | 4.47e-01 | 100.0% | 76.2% |
| 3523144 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.56 | 52.0 | 3.80e-01 | 100.0% | 41.1% |
| 4999914 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.55 | 49.0 | 4.13e-01 | 100.0% | 60.0% |
| 3255397 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 50.0 | 3.93e-01 | 100.0% | 51.0% |
| 3688959 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.55 | 51.0 | 3.64e-01 | 100.0% | 37.1% |
| 4215369 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.55 | 48.0 | 4.09e-01 | 100.0% | 60.0% |
| 4941652 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.54 | 47.0 | 4.01e-01 | 100.0% | 60.0% |
| 4941831 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.53 | 47.0 | 3.97e-01 | 100.0% | 59.2% |
D2
high
residues 100-213