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SRR1747030_scaffold_3_prodigal-single.1__X__X__00084

Bact-Vir

SRR1747030_scaffold_3_prodigal-single.1__X__X__00084

Identity

Kingdom:
phage

Quality

71.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-122
PDB
Domain cluster: rep: LC597490.1__BCO16261.1__X__00208__D260-367
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.73 30.0 4.81e-01 70.1% 100.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 33.0 4.93e-01 82.9% 100.0%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 39.0 5.15e-01 94.0% 100.0%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.69 32.0 4.59e-01 70.9% 96.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 39.0 4.88e-01 100.0% 90.4%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 42.0 5.08e-01 96.6% 97.3%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 34.0 4.10e-01 73.5% 84.8%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 3.18e-01 90.6% 93.3%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 42.0 3.07e-01 92.3% 94.9%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3218198 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 36.0 5.20e-01 94.0% 100.0%
3407089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 40.0 4.79e-01 100.0% 78.8%
4890270 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.71 32.0 4.60e-01 82.1% 92.6%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 34.0 4.53e-01 83.8% 84.6%
591 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.67 42.0 5.08e-01 97.4% 97.4%
3720660 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 42.0 5.12e-01 98.3% 100.0%
3981575 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 32.0 4.55e-01 71.8% 98.2%
4064452 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.63 48.0 4.53e-01 80.3% 86.4%
5033076 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 25.0 3.58e-01 96.6% 80.0%
3840679 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 39.0 4.28e-01 79.5% 83.2%
3547106 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 38.0 4.33e-01 79.5% 87.8%
3765289 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 38.0 4.38e-01 79.5% 90.0%
3576438 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 38.0 4.36e-01 79.5% 92.2%
3407854 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 40.0 4.43e-01 83.8% 91.6%
4954529 3335.1.1.0 ↗ beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B 0.55 29.0 3.93e-01 86.3% 100.0%
3881117 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 40.0 4.32e-01 83.8% 89.0%
3710007 4.1.1.372 ↗ beta barrels › SH3 › SH3 › SH3 › PF30207 0.55 39.0 3.92e-01 99.1% 71.7%
3576128 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 42.0 4.25e-01 94.9% 81.7%
3592525 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.89e-01 98.3% 79.1%
4228206 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.51 29.0 3.36e-01 95.7% 78.8%
4992873 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 26.0 3.60e-01 94.9% 100.0%
4012135 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 40.0 2.94e-01 88.0% 87.8%
D2 high residues 133-177
PDB