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SRR1747030_scaffold_3_prodigal-single.1__X__X__00107
Bact-VirSRR1747030_scaffold_3_prodigal-single.1__X__X__00107
Identity
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-115
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.64 | 39.0 | 3.76e-01 | 94.7% | 54.0% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.63 | 35.0 | 3.61e-01 | 88.6% | 54.9% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 38.0 | 3.71e-01 | 95.6% | 54.4% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.62 | 36.0 | 3.54e-01 | 94.7% | 52.0% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 39.0 | 3.77e-01 | 93.0% | 57.3% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 41.0 | 3.82e-01 | 84.2% | 57.4% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 41.0 | 3.79e-01 | 100.0% | 55.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3517692 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.71 | 40.0 | 3.92e-01 | 70.2% | 50.4% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 38.0 | 4.91e-01 | 72.8% | 100.0% |
| 4432348 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 38.0 | 4.74e-01 | 73.7% | 94.1% |
| 4293453 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 40.0 | 4.70e-01 | 74.6% | 88.7% |
| 3975571 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.64 | 38.0 | 3.20e-01 | 71.1% | 34.7% |
| 3942297 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.63 | 36.0 | 3.69e-01 | 85.1% | 55.8% |
| 3979648 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.63 | 40.0 | 3.72e-01 | 97.4% | 50.7% |
| 3839016 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.63 | 36.0 | 4.58e-01 | 71.1% | 100.0% |
| 4466506 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 40.0 | 4.77e-01 | 71.1% | 100.0% |
| 3225736 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.61 | 46.0 | 4.17e-01 | 78.9% | 94.7% |
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.60 | 37.0 | 3.89e-01 | 95.6% | 66.7% |
| 4555816 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 39.0 | 4.45e-01 | 76.3% | 90.6% |
| 4220126 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.59 | 39.0 | 4.45e-01 | 76.3% | 90.6% |
| 3451171 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 34.0 | 4.33e-01 | 70.2% | 100.0% |
| 3485965 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 32.0 | 4.18e-01 | 87.7% | 100.0% |
| 5074749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 33.0 | 4.08e-01 | 92.1% | 90.0% |
| 4540843 | 4.1.1.434 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2642 | 0.59 | 32.0 | 4.00e-01 | 71.9% | 92.3% |
| 4287411 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.57 | 37.0 | 4.24e-01 | 93.9% | 92.5% |
| 5057445 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.57 | 32.0 | 3.63e-01 | 71.9% | 71.8% |
| 5022491 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.57 | 38.0 | 4.30e-01 | 94.7% | 92.9% |
| 4405252 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.56 | 39.0 | 3.64e-01 | 98.2% | 57.1% |
| 3384708 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.54 | 48.0 | 3.86e-01 | 98.2% | 96.9% |
| 3468015 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.52 | 44.0 | 4.02e-01 | 92.1% | 96.1% |