←Back to structures
SRR1747030_scaffold_3_prodigal-single.1__X__X__00166
Bact-VirSRR1747030_scaffold_3_prodigal-single.1__X__X__00166
Identity
- Kingdom:
- phage
Quality
93.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 564-671
Domain cluster:
rep: IMGVR_UViG_3300008004_000605-3300008004-Ga0100395_100035234__D605-687_762-782
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17657.7 best | DNA_pol3_finger | 67.2 | 1.60e-18 | 96.3% | 53.6% |
D2
medium
residues 1-65_165-276
Domain cluster:
rep: KY000082.1__APD20767.1__X__00069__D1-66_162-228
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02811.27 best | PHP | 54.0 | 3.60e-14 | 94.3% | 59.2% |
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f2bA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.87 | 81.0 | 7.01e-01 | 96.0% | 100.0% |
| 2hpiA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.86 | 83.0 | 6.94e-01 | 99.4% | 99.6% |
| 2hnhA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.85 | 82.0 | 6.88e-01 | 99.4% | 98.5% |
| 1gkpA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.68 | 61.0 | 4.85e-01 | 97.2% | 91.5% |
| 2i9uA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.65 | 60.0 | 4.86e-01 | 97.2% | 99.7% |
| 2oodA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.64 | 59.0 | 4.76e-01 | 97.7% | 99.4% |
| 3e0lA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.64 | 59.0 | 4.81e-01 | 97.7% | 99.4% |
| 2yxoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.64 | 59.0 | 5.04e-01 | 97.2% | 97.7% |
| 4gc3A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 59.0 | 5.10e-01 | 98.3% | 97.7% |
| 3dcpA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 54.0 | 4.56e-01 | 88.7% | 100.0% |
| 4i6kA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 58.0 | 5.00e-01 | 98.3% | 99.6% |
| 3e2vB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 56.0 | 4.43e-01 | 97.2% | 99.4% |
| 3o0fA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 58.0 | 5.40e-01 | 100.0% | 97.7% |
| 2r8cA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 55.0 | 4.56e-01 | 97.2% | 100.0% |
| 2y1hB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 55.0 | 4.78e-01 | 98.3% | 98.9% |
| 2yb1A01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.59 | 56.0 | 5.23e-01 | 99.4% | 98.6% |
| 2wqpA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 49.0 | 4.25e-01 | 90.4% | 93.7% |
| 2eplX02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 49.0 | 4.04e-01 | 93.8% | 89.6% |
| 2anuA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 52.0 | 4.76e-01 | 97.7% | 92.0% |
| 1c7sA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 47.0 | 3.44e-01 | 92.1% | 82.0% |
| 6fnuA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.54 | 47.0 | 3.95e-01 | 93.2% | 88.2% |
| 4m1bA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.54 | 40.0 | 3.87e-01 | 97.2% | 68.0% |
| 3vylA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 45.0 | 3.82e-01 | 90.4% | 96.6% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 45.0 | 3.83e-01 | 89.8% | 90.1% |
| 3pztB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 46.0 | 3.88e-01 | 93.8% | 78.4% |
| 3qc0A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.53 | 43.0 | 3.73e-01 | 86.4% | 100.0% |
| 2yl8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 46.0 | 3.62e-01 | 93.2% | 89.9% |
| 1yhtA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 45.0 | 3.65e-01 | 93.2% | 90.4% |
| 4cvuA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 45.0 | 3.52e-01 | 93.8% | 82.3% |
| 4is2A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 3.96e-01 | 85.3% | 95.3% |
| 3aptA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.52 | 45.0 | 3.81e-01 | 93.2% | 88.4% |
| 4qp0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 45.0 | 3.58e-01 | 94.4% | 88.2% |
| 3dx5A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.52 | 45.0 | 3.92e-01 | 94.9% | 90.8% |
| 1iy8A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 42.0 | 3.71e-01 | 85.9% | 95.0% |
| 5n6uA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 44.0 | 3.63e-01 | 94.4% | 82.5% |
| 3gdgA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 41.0 | 3.59e-01 | 85.9% | 89.5% |
| 6gs8A01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.50 | 42.0 | 3.48e-01 | 87.0% | 86.2% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4173725 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.89 | 86.0 | 7.08e-01 | 100.0% | 98.2% |
| 4539331 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.89 | 86.0 | 6.94e-01 | 100.0% | 98.7% |
| 4501664 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.88 | 85.0 | 6.75e-01 | 100.0% | 95.9% |
| 4385658 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.87 | 84.0 | 6.81e-01 | 100.0% | 96.7% |
| 4277369 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.86 | 82.0 | 6.74e-01 | 98.3% | 96.2% |
| 4226067 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.85 | 83.0 | 6.92e-01 | 100.0% | 100.0% |
| 3838289 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.85 | 83.0 | 6.76e-01 | 100.0% | 97.6% |
| 4042253 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.85 | 82.0 | 7.03e-01 | 100.0% | 100.0% |
| 3941807 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.85 | 81.0 | 6.65e-01 | 98.9% | 100.0% |
| 3291422 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.85 | 82.0 | 6.74e-01 | 100.0% | 96.6% |
| 4176786 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.85 | 82.0 | 6.61e-01 | 100.0% | 99.7% |
| 3952074 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 82.0 | 6.62e-01 | 100.0% | 97.3% |
| 4405362 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 81.0 | 6.95e-01 | 99.4% | 98.8% |
| 4043425 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 82.0 | 6.88e-01 | 100.0% | 98.1% |
| 4139415 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 82.0 | 6.83e-01 | 100.0% | 98.9% |
| 4081292 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 81.0 | 7.00e-01 | 98.9% | 98.8% |
| 4240120 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 81.0 | 6.86e-01 | 100.0% | 98.9% |
| 4508942 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 81.0 | 7.03e-01 | 100.0% | 99.6% |
| 4402535 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.84 | 81.0 | 6.97e-01 | 100.0% | 100.0% |
| 3969370 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.84 | 81.0 | 7.05e-01 | 99.4% | 100.0% |
| 4645572 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.83 | 81.0 | 6.90e-01 | 100.0% | 96.5% |
| 4106500 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.83 | 80.0 | 6.67e-01 | 98.9% | 90.5% |
| 4144582 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.83 | 80.0 | 6.64e-01 | 99.4% | 98.6% |
| 4385591 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.83 | 79.0 | 6.72e-01 | 98.9% | 98.9% |
| 1392196 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.82 | 79.0 | 6.28e-01 | 99.4% | 83.9% |
| 5003703 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.82 | 57.0 | 5.25e-01 | 70.6% | 100.0% |
| 4370676 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.82 | 79.0 | 6.77e-01 | 100.0% | 99.6% |
| 3590785 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.78 | 74.0 | 6.43e-01 | 99.4% | 99.6% |
| 5017280 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.77 | 57.0 | 4.74e-01 | 76.3% | 93.8% |
| 4950934 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.76 | 56.0 | 5.16e-01 | 74.6% | 95.0% |
| 4936359 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.74 | 55.0 | 4.54e-01 | 76.3% | 94.6% |
| 4055015 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.74 | 70.0 | 6.41e-01 | 100.0% | 100.0% |
| 4032341 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.74 | 71.0 | 6.37e-01 | 100.0% | 99.1% |
| 4046424 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.73 | 70.0 | 6.30e-01 | 100.0% | 100.0% |
| 4162930 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.71 | 68.0 | 6.40e-01 | 98.9% | 100.0% |
| 4145211 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.71 | 68.0 | 6.09e-01 | 100.0% | 99.1% |
| 5022281 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.69 | 64.0 | 5.86e-01 | 96.6% | 95.6% |
| 4943473 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.68 | 64.0 | 5.94e-01 | 98.3% | 99.5% |
| 4432962 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.67 | 61.0 | 4.52e-01 | 98.9% | 89.1% |
| 4233485 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.64 | 60.0 | 5.35e-01 | 99.4% | 98.4% |
| 4474527 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.64 | 60.0 | 5.34e-01 | 99.4% | 98.4% |
| 5053635 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.64 | 60.0 | 4.97e-01 | 97.7% | 98.2% |
| 332215 | 2002.1.1.103 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP,PHP_C | 0.64 | 59.0 | 5.04e-01 | 97.2% | 97.7% |
| 5082975 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.62 | 58.0 | 4.78e-01 | 98.3% | 87.0% |
| 4978190 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.62 | 56.0 | 4.91e-01 | 97.2% | 96.2% |
| 5048383 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.61 | 57.0 | 4.77e-01 | 97.7% | 98.6% |
| 4963224 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.61 | 58.0 | 5.38e-01 | 97.7% | 88.6% |
| 4953955 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.61 | 57.0 | 5.27e-01 | 97.7% | 84.9% |
| 5076565 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.61 | 57.0 | 5.41e-01 | 97.7% | 93.7% |
| 4992916 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.61 | 57.0 | 5.40e-01 | 97.7% | 89.3% |
| 3980738 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.60 | 56.0 | 4.70e-01 | 98.3% | 97.9% |
| 4964100 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.60 | 57.0 | 5.15e-01 | 97.7% | 83.1% |
| 4941267 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.60 | 56.0 | 5.27e-01 | 97.7% | 89.0% |
| 4942806 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.60 | 57.0 | 5.59e-01 | 97.7% | 96.2% |
| 4973359 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.60 | 57.0 | 5.40e-01 | 98.3% | 91.5% |
| 5048698 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.60 | 56.0 | 4.61e-01 | 97.2% | 100.0% |
| 4984052 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.60 | 55.0 | 4.82e-01 | 98.3% | 98.8% |
| 4966453 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.60 | 54.0 | 4.74e-01 | 97.2% | 98.8% |
| 5068503 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.60 | 56.0 | 5.19e-01 | 97.7% | 85.6% |
| 5069848 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.60 | 56.0 | 5.27e-01 | 97.7% | 85.2% |
| 5058036 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.60 | 56.0 | 5.38e-01 | 97.2% | 94.4% |
| 5039089 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.60 | 57.0 | 5.46e-01 | 98.9% | 93.3% |
| 4929909 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.59 | 56.0 | 5.26e-01 | 97.2% | 87.8% |
| 5076147 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.59 | 54.0 | 4.82e-01 | 98.3% | 100.0% |
| 4948200 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.59 | 56.0 | 5.28e-01 | 97.7% | 87.8% |
| 5033296 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.59 | 56.0 | 5.11e-01 | 97.7% | 83.6% |
| 3954212 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.59 | 51.0 | 4.15e-01 | 92.1% | 90.3% |
| 4997453 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.59 | 56.0 | 5.34e-01 | 98.3% | 92.0% |
| 5059210 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.59 | 56.0 | 5.16e-01 | 98.3% | 84.7% |
| 4984436 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.59 | 55.0 | 5.21e-01 | 97.2% | 87.8% |
| 5065199 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.59 | 55.0 | 5.08e-01 | 97.7% | 83.2% |
| 5062103 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.59 | 55.0 | 5.03e-01 | 97.7% | 83.6% |
| 5075741 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.59 | 56.0 | 5.38e-01 | 98.9% | 92.8% |
| 4997736 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.59 | 55.0 | 5.20e-01 | 97.7% | 94.6% |
| 5082887 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.58 | 54.0 | 5.21e-01 | 97.7% | 91.0% |
| 5007897 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.58 | 55.0 | 5.15e-01 | 97.7% | 85.6% |
| 3588147 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.58 | 54.0 | 4.00e-01 | 98.3% | 59.8% |
| 5042859 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.58 | 55.0 | 5.30e-01 | 98.3% | 92.3% |
| 4941430 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.58 | 53.0 | 4.73e-01 | 98.3% | 98.0% |
| 3261401 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.57 | 54.0 | 4.71e-01 | 97.7% | 78.4% |
| 4167131 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.54 | 44.0 | 3.47e-01 | 86.4% | 86.8% |
| 416654 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.53 | 43.0 | 3.73e-01 | 86.4% | 99.6% |
| 4033496 | 7512.1.1.12 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_tran_28_C | 0.52 | 42.0 | 4.27e-01 | 87.0% | 85.7% |
| 3931471 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.52 | 43.0 | 3.52e-01 | 87.0% | 80.3% |
| 3670313 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 41.0 | 3.51e-01 | 84.2% | 84.7% |
| None | — | 0.51 | 41.0 | 3.58e-01 | 84.2% | 92.7% | |
| 3003998 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.50 | 44.0 | 4.03e-01 | 93.2% | 89.9% |
D3
medium
residues 66-164
Domain cluster:
rep: BML_08042016_6_5m_scaffold_2_prodigal-single.1__X__X__00102__D296-371
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02811.27 best | PHP | 37.0 | 6.10e-09 | 98.0% | 54.9% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hpiA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.95 | 91.0 | 6.33e-01 | 100.0% | 37.5% |
| 3f2bA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.91 | 70.0 | 5.04e-01 | 100.0% | 31.5% |
| 2hnhA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.85 | 80.0 | 5.65e-01 | 100.0% | 37.0% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4226067 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.96 | 93.0 | 6.44e-01 | 100.0% | 38.9% |
| 3952074 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.96 | 92.0 | 6.24e-01 | 100.0% | 40.3% |
| 4176786 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.95 | 91.0 | 6.16e-01 | 100.0% | 34.8% |
| 3838289 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.94 | 90.0 | 6.15e-01 | 100.0% | 39.3% |
| 4405362 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.88 | 68.0 | 4.80e-01 | 100.0% | 30.4% |
| 4173725 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.87 | 74.0 | 5.14e-01 | 100.0% | 30.9% |
| 4043425 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.87 | 82.0 | 5.73e-01 | 100.0% | 36.3% |
| 4139415 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.85 | 81.0 | 5.65e-01 | 100.0% | 38.2% |
| 1392196 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.85 | 80.0 | 5.42e-01 | 100.0% | 31.5% |
| 3941807 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 79.0 | 5.50e-01 | 100.0% | 39.7% |
| 4277369 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 80.0 | 5.51e-01 | 100.0% | 34.1% |
| 4501664 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 79.0 | 5.36e-01 | 100.0% | 34.6% |
| 4370676 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.83 | 77.0 | 5.49e-01 | 100.0% | 37.3% |
| 4539331 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.83 | 79.0 | 5.38e-01 | 100.0% | 34.7% |
| 4032341 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.82 | 63.0 | 4.68e-01 | 100.0% | 34.3% |
| 3969370 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.82 | 63.0 | 4.62e-01 | 100.0% | 32.7% |
| 4385658 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.81 | 76.0 | 5.24e-01 | 100.0% | 34.0% |
| 4402535 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.81 | 67.0 | 4.87e-01 | 100.0% | 34.1% |
| 4645572 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.81 | 65.0 | 4.65e-01 | 100.0% | 31.9% |
| 3291422 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.79 | 75.0 | 5.18e-01 | 100.0% | 38.6% |
| 4106500 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.77 | 63.0 | 4.47e-01 | 100.0% | 30.9% |
| 4042253 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.76 | 67.0 | 4.79e-01 | 100.0% | 35.4% |
| 4240120 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.75 | 68.0 | 4.83e-01 | 100.0% | 35.5% |
| 4962094 | 7523.1.1.8 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 | 0.51 | 43.0 | 3.38e-01 | 96.0% | 81.4% |
| 3668729 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.50 | 38.0 | 2.77e-01 | 81.8% | 65.1% |
D4
medium
residues 277-443
Domain cluster:
rep: MT074142.1__QIG64518.1__DAC23_244__00240__D392-554
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07733.19 best | DNA_pol3_alpha | 173.8 | 7.60e-51 | 88.0% | 54.6% |
D5
medium
residues 444-501
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hnhA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.85 | 77.0 | 6.97e-01 | 100.0% | 82.1% |
| 1cptA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.60 | 49.0 | 3.07e-01 | 100.0% | 48.3% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 44.0 | 4.09e-01 | 93.1% | 93.7% |