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SRR1747030_scaffold_3_prodigal-single.1__X__X__00201
Bact-VirSRR1747030_scaffold_3_prodigal-single.1__X__X__00201
Identity
- Kingdom:
- phage
Quality
76.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-110
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.67 | 35.0 | 3.77e-01 | 74.0% | 57.5% |
| 2vtfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 36.0 | 3.80e-01 | 88.0% | 62.6% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.60 | 40.0 | 4.14e-01 | 89.0% | 71.3% |
| 5j3uA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 32.0 | 3.02e-01 | 94.0% | 41.9% |
| 3up6A01 | 2.60.40.2580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 47.0 | 4.01e-01 | 90.0% | 69.3% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.57 | 33.0 | 3.92e-01 | 97.0% | 91.8% |
| 2v72A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 34.0 | 3.06e-01 | 90.0% | 43.1% |
| 3gzaB02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 31.0 | 3.19e-01 | 92.0% | 55.1% |
| 2w91A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 33.0 | 3.31e-01 | 88.0% | 58.3% |
| 1m4jA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 47.0 | 4.32e-01 | 99.0% | 85.7% |
| 4uapA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 33.0 | 2.90e-01 | 92.0% | 38.7% |
| 1wscA01 | 3.30.700.20 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 | 0.53 | 37.0 | 3.25e-01 | 84.0% | 48.3% |
| 1jhjA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 35.0 | 3.03e-01 | 88.0% | 41.6% |
| 1tdjA03 | 3.40.1020.10 | Alpha Beta › 3-Layer(aba) Sandwich › Biosynthetic Threonine Deaminase; domain 3 › Biosynthetic Threonine Deaminase; Domain 3 | 0.53 | 44.0 | 3.87e-01 | 94.0% | 88.8% |
| 5xnrA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 32.0 | 3.01e-01 | 92.0% | 47.2% |
| 2l72A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 43.0 | 4.09e-01 | 100.0% | 79.7% |
| 2drvA00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.51 | 45.0 | 3.69e-01 | 100.0% | 60.2% |
| 2xf1A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 43.0 | 4.08e-01 | 97.0% | 78.7% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2325643 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.72 | 34.0 | 3.04e-01 | 93.0% | 32.6% |
| 3686562 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.64 | 47.0 | 3.15e-01 | 77.0% | 53.6% |
| 4938061 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 40.0 | 3.91e-01 | 84.0% | 58.2% |
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.62 | 44.0 | 4.89e-01 | 94.0% | 97.3% |
| 5008695 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 42.0 | 4.34e-01 | 98.0% | 74.7% |
| 3979533 | 10.32.1.55 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glft2_N | 0.59 | 35.0 | 3.17e-01 | 91.0% | 42.1% |
| 3957978 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.58 | 32.0 | 3.35e-01 | 94.0% | 57.8% |
| 3933905 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.57 | 50.0 | 4.52e-01 | 100.0% | 79.3% |
| 4997210 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.56 | 44.0 | 4.61e-01 | 88.0% | 97.8% |
| 3935529 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 32.0 | 2.78e-01 | 100.0% | 35.0% |
| 5070388 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 36.0 | 3.23e-01 | 92.0% | 46.2% |
| 3615237 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.55 | 39.0 | 2.77e-01 | 77.0% | 59.7% |
| 3557265 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.54 | 47.0 | 4.21e-01 | 99.0% | 78.6% |
| 3914632 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.54 | 47.0 | 4.26e-01 | 99.0% | 80.7% |
| 4557537 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.54 | 41.0 | 4.30e-01 | 88.0% | 94.4% |
| 420847 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.53 | 46.0 | 4.33e-01 | 98.0% | 80.8% |
| 4463006 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.52 | 23.0 | 3.16e-01 | 70.0% | 86.7% |
| 4942708 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.52 | 36.0 | 3.63e-01 | 89.0% | 69.5% |
| 3923043 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.52 | 44.0 | 4.49e-01 | 94.0% | 94.0% |
| None | — | 0.51 | 35.0 | 2.92e-01 | 100.0% | 39.4% | |
| 3482147 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.51 | 45.0 | 4.07e-01 | 100.0% | 77.9% |
| 3786112 | 317.1.1.0 ↗ | a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase | 0.51 | 40.0 | 3.47e-01 | 100.0% | 52.1% |
| 3307205 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.50 | 42.0 | 3.97e-01 | 100.0% | 74.4% |
| 3939813 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 36.0 | 3.62e-01 | 100.0% | 76.0% |
| 2572592 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 38.0 | 3.10e-01 | 80.0% | 82.6% |