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SRR1747030_scaffold_3_prodigal-single.1__X__X__00259
Bact-VirSRR1747030_scaffold_3_prodigal-single.1__X__X__00259
Identity
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 206-247_260-324
Domain cluster:
rep: IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_1000007218__D192-304
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.80 | 53.0 | 5.71e-01 | 83.2% | 79.1% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.72 | 47.0 | 4.96e-01 | 83.2% | 74.0% |
| 1a79A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.70 | 50.0 | 5.22e-01 | 83.2% | 80.0% |
| 1xmxA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.70 | 58.0 | 5.18e-01 | 88.8% | 80.5% |
| 4da2A02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.67 | 52.0 | 4.62e-01 | 82.2% | 92.1% |
| 3ieyB00 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.66 | 46.0 | 4.10e-01 | 83.2% | 50.7% |
| 6p4wB01 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.66 | 54.0 | 5.37e-01 | 87.9% | 91.7% |
| 3ieyA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.65 | 49.0 | 5.04e-01 | 83.2% | 84.0% |
| 2eo0B00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.65 | 54.0 | 5.13e-01 | 88.8% | 86.3% |
| 3kjhA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 53.0 | 3.98e-01 | 87.9% | 92.5% |
| 6ll8A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.64 | 44.0 | 4.30e-01 | 71.0% | 91.7% |
| 3odhA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.63 | 49.0 | 3.99e-01 | 82.2% | 73.7% |
| 1brwA02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.63 | 56.0 | 4.22e-01 | 100.0% | 83.1% |
| 3do6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 51.0 | 3.67e-01 | 87.9% | 74.5% |
| 1rznA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 51.0 | 4.57e-01 | 87.9% | 92.0% |
| 2waaA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.62 | 51.0 | 4.13e-01 | 90.7% | 98.1% |
| 3u4qA06 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.61 | 48.0 | 3.78e-01 | 83.2% | 70.9% |
| 6p66D01 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.61 | 49.0 | 4.93e-01 | 86.9% | 89.9% |
| 8dpkD01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.61 | 52.0 | 3.90e-01 | 93.5% | 63.5% |
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.61 | 42.0 | 4.09e-01 | 71.0% | 93.3% |
| 5iz4A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 48.0 | 3.73e-01 | 86.9% | 84.2% |
| 2d1cA01 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.60 | 53.0 | 3.65e-01 | 98.1% | 81.8% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.60 | 46.0 | 4.78e-01 | 84.1% | 86.3% |
| 2jc4A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.60 | 52.0 | 4.04e-01 | 100.0% | 94.5% |
| 2p14A00 | 3.40.91.50 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.60 | 51.0 | 4.22e-01 | 92.5% | 66.1% |
| 6lpmA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.60 | 51.0 | 4.03e-01 | 99.1% | 93.6% |
| 1uwvA03 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 49.0 | 4.50e-01 | 87.9% | 99.3% |
| 3o3mD03 | 3.40.50.11900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 48.0 | 4.40e-01 | 88.8% | 87.0% |
| 4jg3A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.59 | 51.0 | 3.94e-01 | 99.1% | 92.0% |
| 2gzsA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 47.0 | 3.66e-01 | 87.9% | 99.6% |
| 3qyfA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.59 | 50.0 | 4.35e-01 | 93.5% | 97.0% |
| 2ewfA03 | 3.40.91.50 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.58 | 50.0 | 3.92e-01 | 93.5% | 56.9% |
| 1y88A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 52.0 | 4.96e-01 | 99.1% | 91.2% |
| 3ausA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 47.0 | 3.58e-01 | 88.8% | 80.5% |
| 5vegB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.57 | 47.0 | 4.21e-01 | 88.8% | 81.2% |
| 3svtA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 46.0 | 3.50e-01 | 88.8% | 77.4% |
| 7mi4A01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.57 | 44.0 | 3.58e-01 | 81.3% | 48.2% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 48.0 | 4.43e-01 | 94.4% | 97.8% |
| 3av0A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 47.0 | 3.70e-01 | 99.1% | 97.2% |
| 4zv9A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 44.0 | 3.48e-01 | 89.7% | 98.7% |
| 6yuqA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 43.0 | 3.31e-01 | 84.1% | 78.6% |
| 3ksuB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 47.0 | 3.70e-01 | 96.3% | 74.0% |
| 5f2hA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 43.0 | 3.67e-01 | 87.9% | 100.0% |
| 2fgyA03 | 3.30.1330.140 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Carboxysome Shell Carbonic Anhydrase, C-terminal domain | 0.54 | 41.0 | 4.01e-01 | 82.2% | 86.3% |
| 2ok8A02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.53 | 45.0 | 4.03e-01 | 93.5% | 90.8% |
| 2h0aA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 38.0 | 3.77e-01 | 87.9% | 70.5% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 44.0 | 4.09e-01 | 92.5% | 77.9% |
| 5wq5A01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 43.0 | 3.84e-01 | 91.6% | 85.5% |
| 3ngxA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.52 | 36.0 | 4.00e-01 | 72.0% | 100.0% |
| 2ph7A02 | 3.40.50.10670 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain | 0.52 | 40.0 | 4.20e-01 | 88.8% | 93.8% |
| 5cw3C01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 42.0 | 3.83e-01 | 88.8% | 95.9% |
| 6wm6A01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.52 | 39.0 | 3.04e-01 | 78.5% | 62.3% |
| 3k9cB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 40.0 | 3.83e-01 | 87.9% | 71.0% |
| 1no5B00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 41.0 | 4.24e-01 | 97.2% | 93.1% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.51 | 39.0 | 3.16e-01 | 83.2% | 59.4% |
| 4b4uA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.51 | 36.0 | 3.97e-01 | 73.8% | 97.7% |
| 3lftB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 40.0 | 3.66e-01 | 87.9% | 74.8% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 141372 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.80 | 53.0 | 5.71e-01 | 83.2% | 79.1% |
| 5026622 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.75 | 51.0 | 5.41e-01 | 83.2% | 78.9% |
| 4997269 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 61.0 | 5.20e-01 | 87.9% | 81.2% |
| 4970785 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 49.0 | 5.50e-01 | 78.5% | 85.9% |
| 5074941 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 60.0 | 5.98e-01 | 87.9% | 90.9% |
| 4941784 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 54.0 | 4.99e-01 | 78.5% | 77.8% |
| 5042295 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.72 | 48.0 | 5.21e-01 | 83.2% | 82.2% |
| 4927057 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 58.0 | 5.44e-01 | 86.9% | 91.5% |
| 5057728 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 57.0 | 5.38e-01 | 84.1% | 89.6% |
| 4940209 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 46.0 | 4.90e-01 | 83.2% | 74.7% |
| 5002931 | 2008.1.1.11 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA | 0.71 | 55.0 | 4.82e-01 | 81.3% | 92.2% |
| 4220155 | 2008.1.1.11 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA | 0.70 | 54.0 | 4.74e-01 | 81.3% | 90.3% |
| 1030945 | 2008.1.1.34 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc | 0.70 | 58.0 | 5.37e-01 | 88.8% | 88.9% |
| 4948773 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.70 | 50.0 | 4.28e-01 | 83.2% | 47.3% |
| 3610413 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 64.0 | 4.82e-01 | 100.0% | 55.2% |
| 5064957 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 56.0 | 5.01e-01 | 86.9% | 82.7% |
| 4926971 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 55.0 | 4.83e-01 | 84.1% | 74.8% |
| 5044073 | 2008.1.1.11 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA | 0.69 | 54.0 | 4.47e-01 | 83.2% | 89.5% |
| 3249181 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.69 | 49.0 | 5.28e-01 | 83.2% | 87.8% |
| 3287525 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 57.0 | 5.05e-01 | 88.8% | 82.0% |
| 4927077 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 54.0 | 4.28e-01 | 83.2% | 69.5% |
| 4959556 | 2008.1.1.219 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 | 0.68 | 56.0 | 5.51e-01 | 87.9% | 89.6% |
| 4952470 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 56.0 | 5.03e-01 | 88.8% | 76.5% |
| 3604181 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 56.0 | 4.41e-01 | 87.9% | 54.4% |
| 4932500 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.68 | 53.0 | 5.34e-01 | 83.2% | 83.8% |
| 5057713 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.67 | 55.0 | 5.22e-01 | 88.8% | 86.7% |
| 3276260 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.67 | 49.0 | 5.15e-01 | 82.2% | 86.2% |
| 3102571 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 55.0 | 5.01e-01 | 88.8% | 89.5% |
| 5066637 | 2008.1.1.11 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA | 0.67 | 52.0 | 4.62e-01 | 83.2% | 91.0% |
| 5032419 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 58.0 | 4.64e-01 | 94.4% | 81.0% |
| 4998336 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.66 | 54.0 | 4.90e-01 | 87.9% | 82.8% |
| 4956304 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 54.0 | 4.39e-01 | 87.9% | 60.0% |
| 5010218 | 2008.1.1.219 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 | 0.66 | 54.0 | 5.23e-01 | 87.9% | 84.2% |
| 5054762 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.66 | 50.0 | 5.12e-01 | 83.2% | 81.9% |
| 4979146 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.66 | 53.0 | 4.65e-01 | 86.9% | 75.0% |
| 4088649 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.66 | 52.0 | 5.41e-01 | 86.9% | 90.9% |
| 5056661 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 53.0 | 4.73e-01 | 87.9% | 62.0% |
| 5053367 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 52.0 | 4.84e-01 | 84.1% | 73.1% |
| 4935732 | 2008.1.1.165 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_MjaI | 0.65 | 53.0 | 5.29e-01 | 88.8% | 91.8% |
| 5059469 | 2008.1.1.114 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 | 0.65 | 49.0 | 5.17e-01 | 89.7% | 87.8% |
| 4947992 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 53.0 | 5.27e-01 | 87.9% | 84.5% |
| 4946707 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 52.0 | 5.10e-01 | 87.9% | 92.2% |
| 4935861 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 52.0 | 5.03e-01 | 87.9% | 76.7% |
| 5037144 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 53.0 | 5.03e-01 | 87.9% | 78.2% |
| 4941691 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.64 | 52.0 | 4.62e-01 | 86.9% | 72.1% |
| 5010590 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 49.0 | 5.00e-01 | 84.1% | 82.9% |
| 4488209 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 51.0 | 4.92e-01 | 87.9% | 76.5% |
| 5060649 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 51.0 | 4.89e-01 | 84.1% | 80.0% |
| 5080532 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.63 | 50.0 | 5.03e-01 | 87.9% | 83.3% |
| 5027581 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.63 | 51.0 | 5.12e-01 | 86.0% | 89.1% |
| 5025458 | 2008.1.1.114 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 | 0.63 | 42.0 | 4.70e-01 | 82.2% | 85.9% |
| 5040208 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 50.0 | 4.69e-01 | 86.0% | 77.0% |
| 4962258 | 2008.1.1.219 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 | 0.63 | 51.0 | 5.02e-01 | 87.9% | 93.9% |
| 5057413 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.63 | 52.0 | 4.96e-01 | 89.7% | 81.6% |
| 5024562 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.63 | 52.0 | 4.85e-01 | 89.7% | 73.3% |
| 140941 | 2008.1.1.8 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › BamHI | 0.63 | 49.0 | 3.99e-01 | 82.2% | 73.7% |
| 5050178 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.63 | 53.0 | 4.94e-01 | 90.7% | 78.5% |
| 4967964 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.63 | 52.0 | 5.00e-01 | 90.7% | 79.2% |
| 4928653 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.63 | 51.0 | 4.33e-01 | 87.9% | 65.1% |
| 5081063 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 49.0 | 3.87e-01 | 83.2% | 52.3% |
| 4446863 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 50.0 | 4.81e-01 | 87.9% | 74.8% |
| 4508113 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 50.0 | 5.14e-01 | 88.8% | 89.4% |
| 4989011 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.62 | 49.0 | 4.38e-01 | 84.1% | 94.7% |
| 4931384 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.62 | 52.0 | 5.01e-01 | 90.7% | 82.5% |
| 4988932 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.62 | 52.0 | 4.93e-01 | 89.7% | 80.0% |
| 4063889 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.62 | 49.0 | 4.84e-01 | 84.1% | 89.4% |
| 4561496 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.62 | 52.0 | 4.79e-01 | 90.7% | 73.3% |
| 4153860 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.62 | 44.0 | 4.16e-01 | 72.9% | 94.4% |
| 5076022 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.62 | 52.0 | 5.18e-01 | 90.7% | 89.1% |
| 4959059 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.62 | 48.0 | 4.82e-01 | 83.2% | 84.5% |
| 5063644 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.61 | 51.0 | 4.98e-01 | 89.7% | 87.0% |
| 4995282 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.61 | 51.0 | 5.12e-01 | 90.7% | 90.0% |
| 5031044 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.61 | 51.0 | 4.86e-01 | 90.7% | 79.2% |
| 4620724 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.61 | 48.0 | 4.64e-01 | 84.1% | 85.0% |
| 4947990 | 2008.1.1.218 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HTH_3 | 0.61 | 51.0 | 5.00e-01 | 90.7% | 86.1% |
| 4969494 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.61 | 49.0 | 3.95e-01 | 87.9% | 61.4% |
| 4215086 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 48.0 | 4.47e-01 | 83.2% | 91.5% |
| 4940725 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.61 | 51.0 | 4.75e-01 | 89.7% | 78.5% |
| 4332382 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.61 | 48.0 | 4.65e-01 | 84.1% | 79.0% |
| 4990184 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.61 | 51.0 | 5.00e-01 | 90.7% | 85.2% |
| 4477991 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.61 | 48.0 | 3.63e-01 | 83.2% | 61.2% |
| 4089106 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.61 | 51.0 | 4.76e-01 | 90.7% | 74.6% |
| 5067595 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.60 | 50.0 | 4.63e-01 | 90.7% | 70.7% |
| 4971488 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.60 | 51.0 | 4.71e-01 | 91.6% | 73.3% |
| 5078094 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 47.0 | 4.68e-01 | 83.2% | 81.6% |
| 4934246 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 52.0 | 4.87e-01 | 93.5% | 82.3% |
| 5082429 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.60 | 50.0 | 4.77e-01 | 90.7% | 79.2% |
| 3877139 | 7510.1.1.1 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh | 0.60 | 53.0 | 4.30e-01 | 98.1% | 79.5% |
| 3875201 | 7510.1.1.1 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh | 0.60 | 53.0 | 4.38e-01 | 98.1% | 83.2% |
| 4985014 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 49.0 | 4.98e-01 | 93.5% | 89.5% |
| 4277443 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.60 | 50.0 | 4.81e-01 | 90.7% | 81.7% |
| 4067720 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.58 | 41.0 | 3.85e-01 | 72.0% | 95.4% |
| 3282982 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.55 | 48.0 | 3.81e-01 | 100.0% | 94.5% |
| 4110545 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 38.0 | 3.64e-01 | 72.9% | 93.8% |
| 4078398 | 2003.1.5.174 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 | 0.54 | 45.0 | 3.11e-01 | 91.6% | 67.6% |
| 4414555 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.53 | 40.0 | 3.13e-01 | 82.2% | 41.7% |
| 2623870 | 2484.1.1.44 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pox_A22 | 0.51 | 41.0 | 3.73e-01 | 88.8% | 89.9% |
D2
high
residues 328-395
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 52.0 | 5.10e-01 | 76.5% | 65.3% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 55.0 | 4.99e-01 | 88.2% | 57.3% |
| 2p5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 53.0 | 5.89e-01 | 76.5% | 94.2% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 56.0 | 5.72e-01 | 91.2% | 79.1% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 51.0 | 5.14e-01 | 77.9% | 68.6% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 57.0 | 5.56e-01 | 83.8% | 75.3% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 59.0 | 5.48e-01 | 85.3% | 70.6% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 49.0 | 5.12e-01 | 73.5% | 73.0% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 54.0 | 4.82e-01 | 83.8% | 54.7% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 55.0 | 4.27e-01 | 88.2% | 37.7% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 53.0 | 4.29e-01 | 83.8% | 41.1% |
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 52.0 | 4.96e-01 | 89.7% | 64.6% |
| 2l4mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 52.0 | 5.26e-01 | 88.2% | 78.3% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 53.0 | 4.75e-01 | 88.2% | 57.4% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 53.0 | 4.21e-01 | 89.7% | 39.3% |
| 1sfeA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 5.39e-01 | 92.6% | 71.4% |
| 2doaA00 | 1.10.10.2670 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › E3 ubiquitin-protein ligase | 0.71 | 52.0 | 4.49e-01 | 89.7% | 51.0% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 51.0 | 4.76e-01 | 77.9% | 79.3% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 56.0 | 4.74e-01 | 92.6% | 52.7% |
| 1p2fA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 4.99e-01 | 88.2% | 68.4% |
| 1yg2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 5.12e-01 | 83.8% | 74.7% |
| 2m8gX00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 45.0 | 4.50e-01 | 86.8% | 64.3% |
| 1ku2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 5.28e-01 | 82.4% | 91.2% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 4.56e-01 | 89.7% | 59.6% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 52.0 | 4.34e-01 | 82.4% | 55.7% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 5.09e-01 | 83.8% | 78.1% |
| 3dfgA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 45.0 | 5.15e-01 | 79.4% | 97.9% |
| 2fq3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 45.0 | 4.21e-01 | 70.6% | 60.0% |
| 6az1a00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 5.04e-01 | 88.2% | 79.2% |
| 2aqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 43.0 | 3.94e-01 | 88.2% | 53.3% |
| 6xiuA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 47.0 | 4.10e-01 | 83.8% | 54.5% |
| 1darA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 40.0 | 2.72e-01 | 70.6% | 46.1% |
| 3mn2A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 44.0 | 3.77e-01 | 82.4% | 73.1% |
| 3h2zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.57 | 46.0 | 3.42e-01 | 88.2% | 49.4% |
| 7r0kB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 45.0 | 3.07e-01 | 92.6% | 52.4% |
| 3lpxA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.54 | 41.0 | 3.53e-01 | 80.9% | 91.3% |
| 1txuA02 | 1.20.1050.80 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › VPS9 domain | 0.53 | 46.0 | 3.57e-01 | 100.0% | 53.8% |
| 2hkvA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.53 | 44.0 | 3.54e-01 | 94.1% | 58.2% |
| 1a0pA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.53 | 41.0 | 3.76e-01 | 85.3% | 96.7% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4287688 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.80 | 63.0 | 5.55e-01 | 83.8% | 63.2% |
| 5020571 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.79 | 59.0 | 5.08e-01 | 85.3% | 51.4% |
| 5011614 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.79 | 56.0 | 5.79e-01 | 85.3% | 78.5% |
| 4098825 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 62.0 | 5.62e-01 | 83.8% | 66.7% |
| 3925084 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.79 | 54.0 | 4.59e-01 | 72.1% | 88.2% |
| 4941358 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 57.0 | 5.43e-01 | 88.2% | 66.3% |
| 5046858 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 56.0 | 5.78e-01 | 76.5% | 87.7% |
| 3303351 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.77 | 61.0 | 6.48e-01 | 86.8% | 98.3% |
| 5053259 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.77 | 54.0 | 5.30e-01 | 83.8% | 68.0% |
| 3363111 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.77 | 61.0 | 6.48e-01 | 86.8% | 98.3% |
| 4372770 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.76 | 59.0 | 5.30e-01 | 83.8% | 63.2% |
| 4107841 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.76 | 59.0 | 5.38e-01 | 83.8% | 66.7% |
| 4672682 | 101.1.2.27 ↗ | alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind | 0.76 | 59.0 | 5.18e-01 | 83.8% | 60.0% |
| 4571259 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.76 | 59.0 | 5.38e-01 | 83.8% | 67.8% |
| 5006819 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.75 | 54.0 | 4.82e-01 | 83.8% | 54.7% |
| 3188521 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 59.0 | 5.36e-01 | 85.3% | 65.6% |
| 5010525 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 55.0 | 5.22e-01 | 83.8% | 67.1% |
| 4929381 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 56.0 | 5.42e-01 | 86.8% | 73.3% |
| 5071770 | 101.1.2.923 ↗ | alpha arrays › HTH › HTH › winged helix domain › Zn_ribbon_PF0610 | 0.74 | 62.0 | 5.39e-01 | 89.7% | 92.9% |
| 4964920 | 101.1.2.944 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26486 | 0.74 | 56.0 | 5.89e-01 | 79.4% | 90.0% |
| 4679870 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 58.0 | 5.14e-01 | 83.8% | 63.2% |
| 4258325 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 57.0 | 4.88e-01 | 83.8% | 54.5% |
| 4468068 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.74 | 57.0 | 5.04e-01 | 83.8% | 60.0% |
| 4940863 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 55.0 | 5.22e-01 | 85.3% | 66.3% |
| 5079762 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.73 | 55.0 | 5.14e-01 | 88.2% | 64.7% |
| 4627782 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 55.0 | 5.09e-01 | 83.8% | 63.5% |
| 4129764 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.73 | 57.0 | 5.43e-01 | 83.8% | 76.2% |
| 5038207 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 53.0 | 4.43e-01 | 83.8% | 44.2% |
| 3941591 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 62.0 | 5.73e-01 | 98.5% | 75.3% |
| 4032499 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 55.0 | 5.36e-01 | 82.4% | 90.7% |
| 4944350 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 56.0 | 5.28e-01 | 88.2% | 69.9% |
| 3602631 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.71 | 50.0 | 4.76e-01 | 83.8% | 62.5% |
| 4029108 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 55.0 | 4.76e-01 | 88.2% | 53.2% |
| 4210079 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 54.0 | 5.06e-01 | 83.8% | 65.9% |
| 4420420 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 55.0 | 5.00e-01 | 83.8% | 66.7% |
| 5027611 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 56.0 | 5.47e-01 | 88.2% | 82.7% |
| 5005217 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 52.0 | 5.41e-01 | 85.3% | 91.7% |
| 4409870 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 56.0 | 5.73e-01 | 88.2% | 95.4% |
| 5047381 | 101.1.2.222 ↗ | alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N | 0.69 | 50.0 | 4.49e-01 | 83.8% | 54.7% |
| 3600737 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 49.0 | 5.07e-01 | 83.8% | 81.5% |
| 4960122 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 50.0 | 4.62e-01 | 83.8% | 61.1% |
| 3538344 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 51.0 | 4.88e-01 | 85.3% | 72.5% |
| 4043451 | 3826.1.1.22 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › UPF0236 | 0.65 | 40.0 | 2.84e-01 | 76.5% | 21.5% |
| 3600734 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 52.0 | 4.63e-01 | 89.7% | 61.0% |
| 3633474 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.61 | 48.0 | 3.92e-01 | 89.7% | 77.0% |
| 3349750 | 3567.1.1.75 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PTPLA | 0.51 | 43.0 | 3.16e-01 | 100.0% | 52.9% |
D3
high
residues 401-455
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nrkA02 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.60 | 50.0 | 4.12e-01 | 100.0% | 93.6% |
| 4dt4A01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.57 | 47.0 | 4.31e-01 | 100.0% | 87.3% |
| 5jzjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 36.0 | 3.16e-01 | 78.2% | 42.6% |
| 6baoA03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.51 | 40.0 | 3.09e-01 | 94.5% | 46.4% |
| 1htwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 3.01e-01 | 94.5% | 38.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4313853 | 284.1.1.3 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase | 0.63 | 52.0 | 4.57e-01 | 100.0% | 96.7% |
| 3473329 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.51 | 43.0 | 4.08e-01 | 100.0% | 80.0% |
D4
medium
residues 6-57
Domain cluster:
rep: NC_031022.1__YP_009280252.1__BI056_gp065__00065__D70-126
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5l37C00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.68 | 47.0 | 3.97e-01 | 73.1% | 86.0% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 52.0 | 4.97e-01 | 84.6% | 93.3% |
| 4fg9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 51.0 | 4.47e-01 | 84.6% | 92.4% |
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.66 | 56.0 | 4.73e-01 | 100.0% | 81.9% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 52.0 | 5.52e-01 | 84.6% | 100.0% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.66 | 57.0 | 4.57e-01 | 100.0% | 77.6% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.66 | 56.0 | 4.65e-01 | 100.0% | 78.6% |
| 3a7fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 49.0 | 4.07e-01 | 80.8% | 87.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 51.0 | 4.44e-01 | 84.6% | 68.4% |
| 5xilA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 55.0 | 4.25e-01 | 100.0% | 62.5% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 48.0 | 4.49e-01 | 78.8% | 76.9% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 48.0 | 4.53e-01 | 78.8% | 84.1% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 48.0 | 4.68e-01 | 78.8% | 98.2% |
| 4tm3A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 50.0 | 2.98e-01 | 86.5% | 38.2% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 55.0 | 4.48e-01 | 100.0% | 73.1% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.64 | 50.0 | 4.98e-01 | 84.6% | 83.3% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 54.0 | 4.23e-01 | 100.0% | 63.4% |
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.64 | 45.0 | 2.75e-01 | 76.9% | 42.7% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 49.0 | 4.53e-01 | 84.6% | 85.1% |
| 1httA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 53.0 | 4.48e-01 | 100.0% | 79.6% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.63 | 49.0 | 4.78e-01 | 84.6% | 75.4% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 46.0 | 3.81e-01 | 76.9% | 98.9% |
| 2q5iA03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 53.0 | 4.15e-01 | 100.0% | 66.1% |
| 2i4lB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 52.0 | 4.37e-01 | 100.0% | 78.2% |
| 3aqqA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 43.0 | 3.56e-01 | 73.1% | 62.6% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 48.0 | 4.53e-01 | 82.7% | 88.7% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.63 | 51.0 | 5.41e-01 | 86.5% | 97.8% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.63 | 52.0 | 5.22e-01 | 90.4% | 94.2% |
| 3e19B01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.62 | 51.0 | 4.78e-01 | 90.4% | 93.8% |
| 2j3lA01 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 51.0 | 4.14e-01 | 100.0% | 67.3% |
| 3dlsB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 51.0 | 4.31e-01 | 98.1% | 91.8% |
| 5e3iA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 53.0 | 4.38e-01 | 100.0% | 82.8% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 52.0 | 3.96e-01 | 96.2% | 44.3% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 49.0 | 4.72e-01 | 86.5% | 91.5% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 51.0 | 4.40e-01 | 92.3% | 74.1% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 52.0 | 5.18e-01 | 92.3% | 96.2% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.61 | 43.0 | 3.98e-01 | 75.0% | 64.2% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 51.0 | 4.55e-01 | 92.3% | 69.9% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.60 | 50.0 | 4.17e-01 | 98.1% | 63.3% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 45.0 | 4.44e-01 | 84.6% | 96.6% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 49.0 | 4.22e-01 | 90.4% | 63.7% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 45.0 | 4.39e-01 | 84.6% | 94.8% |
| 2wfbA00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.59 | 42.0 | 3.38e-01 | 80.8% | 56.7% |
| 4o38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 48.0 | 3.97e-01 | 92.3% | 94.8% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 45.0 | 4.39e-01 | 84.6% | 93.2% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 50.0 | 4.88e-01 | 94.2% | 87.5% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 46.0 | 4.43e-01 | 90.4% | 93.4% |
| 3caiA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 48.0 | 3.58e-01 | 96.2% | 64.7% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.58 | 48.0 | 3.02e-01 | 100.0% | 22.4% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 46.0 | 4.70e-01 | 94.2% | 92.3% |
| 6aikB00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.57 | 46.0 | 2.97e-01 | 98.1% | 83.4% |
| 2fokA03 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.57 | 48.0 | 3.42e-01 | 100.0% | 84.6% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.57 | 44.0 | 3.68e-01 | 94.2% | 47.4% |
| 4bs9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 43.0 | 2.93e-01 | 84.6% | 70.7% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 44.0 | 2.73e-01 | 90.4% | 16.6% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.56 | 41.0 | 4.05e-01 | 98.1% | 77.2% |
| 2yrrA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 47.0 | 3.79e-01 | 100.0% | 77.5% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 49.0 | 4.00e-01 | 98.1% | 65.6% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 42.0 | 3.99e-01 | 88.5% | 82.1% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 3.39e-01 | 96.2% | 63.6% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 45.0 | 2.84e-01 | 100.0% | 20.9% |
| 3i35A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 43.0 | 4.26e-01 | 90.4% | 96.5% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 41.0 | 3.89e-01 | 80.8% | 76.6% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 44.0 | 4.18e-01 | 88.5% | 86.9% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 43.0 | 3.40e-01 | 100.0% | 61.7% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 44.0 | 3.96e-01 | 92.3% | 84.0% |
| 1tv8B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 46.0 | 2.88e-01 | 100.0% | 79.1% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 39.0 | 3.72e-01 | 78.8% | 84.4% |
| 2vnuD04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 3.79e-01 | 100.0% | 87.3% |
| 1wiiA01 | 2.20.25.190 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 36.0 | 3.53e-01 | 78.8% | 82.3% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.51 | 43.0 | 3.18e-01 | 100.0% | 44.4% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 35.0 | 3.35e-01 | 78.8% | 60.6% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.51 | 35.0 | 2.95e-01 | 76.9% | 39.4% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 39.0 | 2.51e-01 | 100.0% | 36.7% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.50 | 36.0 | 3.41e-01 | 84.6% | 94.4% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3620947 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.82 | 56.0 | 5.50e-01 | 71.2% | 76.4% |
| 3494671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 47.0 | 5.00e-01 | 73.1% | 75.6% |
| 4163844 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.70 | 60.0 | 5.02e-01 | 100.0% | 81.1% |
| 3609256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 57.0 | 4.85e-01 | 90.4% | 74.1% |
| 3262212 | 7502.1.1.7 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 | 0.69 | 57.0 | 4.65e-01 | 100.0% | 70.9% |
| 3953025 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 50.0 | 4.29e-01 | 76.9% | 73.8% |
| 3518287 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.67 | 56.0 | 4.31e-01 | 92.3% | 51.3% |
| 5064174 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.67 | 59.0 | 4.86e-01 | 100.0% | 79.8% |
| 3967023 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.67 | 49.0 | 3.17e-01 | 80.8% | 55.7% |
| 3197762 | 7502.1.1.7 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 | 0.67 | 56.0 | 4.46e-01 | 100.0% | 67.0% |
| 3180655 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.66 | 56.0 | 4.12e-01 | 100.0% | 68.7% |
| 4286008 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.66 | 56.0 | 4.62e-01 | 100.0% | 77.0% |
| 4306285 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 53.0 | 4.82e-01 | 88.5% | 78.6% |
| 5049811 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.66 | 46.0 | 2.73e-01 | 71.2% | 10.6% |
| 4269256 | 4.1.1.245 ↗ | beta barrels › SH3 › SH3 › SH3 › SspH | 0.65 | 57.0 | 5.40e-01 | 94.2% | 83.3% |
| 4260111 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 54.0 | 4.61e-01 | 100.0% | 81.1% |
| 4564801 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 57.0 | 4.71e-01 | 100.0% | 80.0% |
| 3633434 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 51.0 | 4.61e-01 | 84.6% | 78.6% |
| 3920103 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.64 | 50.0 | 4.20e-01 | 84.6% | 61.1% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.64 | 53.0 | 4.94e-01 | 90.4% | 78.5% |
| 3175591 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.64 | 45.0 | 3.45e-01 | 73.1% | 89.6% |
| 4046713 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 53.0 | 4.54e-01 | 100.0% | 85.6% |
| 4142693 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 52.0 | 4.53e-01 | 100.0% | 84.4% |
| 4595963 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.63 | 54.0 | 4.53e-01 | 100.0% | 80.0% |
| 4381486 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.63 | 53.0 | 4.60e-01 | 100.0% | 86.4% |
| 4441936 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 53.0 | 4.07e-01 | 100.0% | 58.5% |
| 4392197 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 52.0 | 4.36e-01 | 100.0% | 76.0% |
| 3416133 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.62 | 48.0 | 4.29e-01 | 84.6% | 73.3% |
| 4962338 | 375.1.1.234 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_PaaD | 0.62 | 43.0 | 4.76e-01 | 73.1% | 100.0% |
| 4050524 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.62 | 45.0 | 4.21e-01 | 76.9% | 87.7% |
| 3222195 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.62 | 52.0 | 4.85e-01 | 92.3% | 92.3% |
| 4639808 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.62 | 52.0 | 4.49e-01 | 100.0% | 90.0% |
| 3477236 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.62 | 44.0 | 2.44e-01 | 75.0% | 6.9% |
| 4678731 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.62 | 46.0 | 4.23e-01 | 78.8% | 83.1% |
| 3398298 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.61 | 46.0 | 4.06e-01 | 82.7% | 80.0% |
| 4168836 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 45.0 | 4.12e-01 | 78.8% | 81.4% |
| 4275104 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.61 | 50.0 | 4.07e-01 | 100.0% | 63.5% |
| 4039724 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 45.0 | 4.16e-01 | 76.9% | 87.7% |
| 4062573 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.61 | 52.0 | 4.27e-01 | 100.0% | 78.0% |
| 3846212 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.61 | 47.0 | 4.11e-01 | 84.6% | 67.5% |
| 3842441 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.61 | 48.0 | 4.59e-01 | 86.5% | 90.0% |
| 3688923 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.60 | 45.0 | 3.98e-01 | 78.8% | 85.3% |
| 3738728 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.60 | 43.0 | 3.55e-01 | 75.0% | 87.4% |
| 4441518 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.60 | 48.0 | 4.17e-01 | 100.0% | 83.2% |
| 4963580 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.60 | 50.0 | 4.35e-01 | 94.2% | 85.0% |
| 4434149 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.59 | 44.0 | 4.11e-01 | 78.8% | 87.7% |
| 139373 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.59 | 42.0 | 3.38e-01 | 80.8% | 56.7% |
| 4094714 | 4292.2.1.1 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG | 0.59 | 47.0 | 4.15e-01 | 96.2% | 68.2% |
| 5037595 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.58 | 49.0 | 2.94e-01 | 98.1% | 20.5% |
| 4059146 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 43.0 | 3.99e-01 | 78.8% | 75.4% |
| 4102050 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.58 | 45.0 | 3.53e-01 | 84.6% | 67.3% |
| 3553625 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 42.0 | 4.15e-01 | 80.8% | 81.8% |
| 5054060 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.57 | 43.0 | 3.82e-01 | 86.5% | 91.8% |
| 4043601 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.57 | 41.0 | 3.88e-01 | 76.9% | 87.7% |
| 3570230 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.57 | 49.0 | 4.11e-01 | 98.1% | 88.9% |
| 4032291 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.57 | 41.0 | 3.86e-01 | 78.8% | 87.7% |
| 4116168 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.57 | 43.0 | 3.10e-01 | 84.6% | 26.2% |
| 4582456 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.56 | 42.0 | 3.80e-01 | 78.8% | 70.0% |
| 3190226 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 36.0 | 2.86e-01 | 73.1% | 29.4% |
| 3388135 | 4292.2.1.1 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG | 0.55 | 44.0 | 4.01e-01 | 94.2% | 77.3% |
| 3356481 | 386.1.1.117 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 | 0.55 | 42.0 | 3.69e-01 | 94.2% | 53.0% |
| 3784907 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.55 | 38.0 | 3.33e-01 | 75.0% | 67.1% |
| 1171961 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.54 | 43.0 | 4.19e-01 | 100.0% | 84.1% |
| 4210916 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.54 | 41.0 | 2.85e-01 | 86.5% | 70.2% |
| 3930651 | 3246.1.1.4 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAMTS_CR_3 | 0.54 | 40.0 | 3.42e-01 | 88.5% | 46.3% |
| 3581508 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.54 | 42.0 | 3.07e-01 | 86.5% | 66.2% |
| 3175902 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 41.0 | 4.05e-01 | 96.2% | 81.7% |
| 3910727 | 4.1.1.353 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 | 0.53 | 42.0 | 4.00e-01 | 94.2% | 89.2% |
| 3246854 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 43.0 | 4.14e-01 | 100.0% | 86.2% |
| 3515117 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 42.0 | 2.80e-01 | 88.5% | 71.0% |
| 4966836 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 43.0 | 4.26e-01 | 98.1% | 98.2% |
| 4025648 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.52 | 41.0 | 2.80e-01 | 88.5% | 76.5% |
| 5014689 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 41.0 | 4.08e-01 | 100.0% | 88.3% |
| 3646226 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.52 | 40.0 | 3.63e-01 | 90.4% | 86.3% |
| 3580264 | 366.1.1.8 ↗ | few secondary structure elements › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › ADAMTS_CR_3 | 0.52 | 41.0 | 3.36e-01 | 84.6% | 53.0% |
| 5023930 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 39.0 | 3.52e-01 | 88.5% | 61.2% |
| 3592754 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 42.0 | 3.44e-01 | 100.0% | 70.6% |
| 3948516 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.52 | 38.0 | 3.58e-01 | 78.8% | 92.3% |
| 3744424 | 312.1.1.6 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 | 0.52 | 43.0 | 2.92e-01 | 98.1% | 94.0% |
| 3234330 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 37.0 | 3.09e-01 | 82.7% | 49.1% |
| 3186255 | 223.1.1.21 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like | 0.52 | 41.0 | 2.66e-01 | 100.0% | 63.4% |
| 3510695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 40.0 | 3.67e-01 | 96.2% | 82.5% |
| 3184613 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 39.0 | 2.79e-01 | 82.7% | 35.4% |
| 3709800 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 39.0 | 3.45e-01 | 96.2% | 71.6% |
| 3710675 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.51 | 39.0 | 4.07e-01 | 84.6% | 97.9% |
| 3175626 | 331.1.1.13 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C | 0.50 | 41.0 | 3.68e-01 | 94.2% | 86.7% |
D5
medium
residues 118-205
Domain cluster:
rep: LC576631.1__BCK59760.1__X__00065__D158-237
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4csqA00 | 2.30.29.190 | Mainly Beta › Roll › PH-domain like › | 0.52 | 36.0 | 3.43e-01 | 73.9% | 86.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3605531 | 375.1.1.77 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 | 0.74 | 58.0 | 5.93e-01 | 81.8% | 85.7% |
| 3592370 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.67 | 60.0 | 5.39e-01 | 96.6% | 90.8% |
| 3397293 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.54 | 41.0 | 2.43e-01 | 80.7% | 28.4% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.53 | 33.0 | 3.94e-01 | 70.5% | 95.0% |
| 3180655 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.52 | 37.0 | 3.19e-01 | 75.0% | 74.7% |
| 3514631 | 1016.1.1.1 ↗ | alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK | 0.52 | 38.0 | 3.42e-01 | 77.3% | 83.9% |
| 3739884 | 1016.1.1.1 ↗ | alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK | 0.51 | 38.0 | 3.37e-01 | 78.4% | 79.8% |
| 2321219 | 1016.1.1.1 ↗ | alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK | 0.51 | 37.0 | 3.30e-01 | 78.4% | 67.9% |