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SRR1747032_scaffold_11_prodigal-single.1__X__X__00008
Bact-VirSRR1747032_scaffold_11_prodigal-single.1__X__X__00008
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-228
Domain cluster:
rep: MH898687.1__AYP69195.1__Edno5_0047__00047__D1-174
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.66 | 49.0 | 5.28e-01 | 87.0% | 89.2% |
| 4u08A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.65 | 59.0 | 4.52e-01 | 96.7% | 49.1% |
| 2xwtC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 58.0 | 5.37e-01 | 97.3% | 76.5% |
| 4cnmA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 56.0 | 4.86e-01 | 95.7% | 68.9% |
| 3zyiA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 57.0 | 4.79e-01 | 96.7% | 58.7% |
| 3i2tA01 | 3.80.20.20 | Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain | 0.62 | 49.0 | 4.97e-01 | 82.1% | 93.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3742142 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 61.0 | 5.70e-01 | 99.5% | 84.1% |
| 3784867 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 61.0 | 5.68e-01 | 99.5% | 92.7% |
| 3705252 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 59.0 | 4.99e-01 | 97.8% | 61.4% |
| 3883960 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.64 | 60.0 | 5.30e-01 | 98.9% | 80.8% |
| 3231440 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.63 | 53.0 | 5.46e-01 | 88.0% | 93.7% |
| 3986077 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 57.0 | 4.94e-01 | 97.3% | 69.1% |
| 3487896 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 55.0 | 5.16e-01 | 94.6% | 82.7% |
| 3174454 | 5086.1.1.121 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Hyphal_reg_CWP | 0.61 | 56.0 | 5.04e-01 | 98.9% | 81.2% |
| 3728533 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.61 | 56.0 | 4.63e-01 | 100.0% | 94.1% |
| 3705191 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.58 | 54.0 | 4.49e-01 | 99.5% | 65.8% |