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SRR1747032_scaffold_11_prodigal-single.1__X__X__00333

Bact-Vir

SRR1747032_scaffold_11_prodigal-single.1__X__X__00333

Identity

Kingdom:
phage

Quality

61.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 333-515
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09967.16 best DUF2201 50.8 2.60e-13 75.4% 97.6%
D2 medium residues 279-331
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wwwC01 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.68 47.0 4.78e-01 73.6% 84.6%
2losA00 1.10.10.1740 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like 0.56 39.0 3.16e-01 75.5% 42.0%
4hkaA02 1.10.287.3810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 38.0 3.89e-01 98.1% 94.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3992924 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 49.0 3.38e-01 94.3% 38.0%
3706550 109.4.1.72 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.56 39.0 2.72e-01 73.6% 31.9%