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SRR1747032_scaffold_22_prodigal-single.1__X__X__00138

Bact-Vir

SRR1747032_scaffold_22_prodigal-single.1__X__X__00138

Identity

Kingdom:
phage

Quality

63.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-66
PDB
D2 high residues 393-493
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.60 22.0 2.92e-01 87.1% 56.4%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.53 36.0 2.70e-01 70.3% 61.8%
3ly7A01 3.40.50.11830 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 37.0 3.26e-01 76.2% 81.4%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3388095 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.61 44.0 3.56e-01 74.3% 92.6%
3839169 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.59 42.0 3.27e-01 74.3% 92.2%
3617912 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.58 40.0 3.81e-01 70.3% 82.5%
3166231 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.57 41.0 3.40e-01 76.2% 94.7%
3212468 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.57 40.0 4.06e-01 73.3% 91.0%
3839019 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.55 45.0 3.26e-01 92.1% 76.8%
3890058 358.1.1.3 ↗ a+b complex topology › SRCR-like › SRCR-like › SRCR-like › SRCR_2 0.50 26.0 2.73e-01 70.3% 51.6%