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SRR1747035_scaffold_2_prodigal-single.1__X__X__00016
Bact-VirSRR1747035_scaffold_2_prodigal-single.1__X__X__00016
Identity
- Kingdom:
- phage
Quality
83.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-96
Domain cluster:
rep: OQ632216.1__WGL32639.1__Arash_gp188__00188__D185-268
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.70 | 52.0 | 5.24e-01 | 78.0% | 81.7% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.68 | 57.0 | 5.13e-01 | 92.7% | 79.6% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.68 | 45.0 | 5.16e-01 | 73.2% | 93.3% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.67 | 56.0 | 4.23e-01 | 90.2% | 66.0% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 43.0 | 4.87e-01 | 72.0% | 88.9% |
| 4nyqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 50.0 | 4.06e-01 | 81.7% | 44.4% |
| 7jvhC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.64 | 56.0 | 3.76e-01 | 100.0% | 45.3% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.63 | 55.0 | 3.65e-01 | 100.0% | 43.7% |
| 4fvkA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.62 | 55.0 | 3.62e-01 | 100.0% | 45.5% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 47.0 | 4.10e-01 | 81.7% | 82.0% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.62 | 44.0 | 3.84e-01 | 90.2% | 49.2% |
| 6serA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 49.0 | 3.55e-01 | 86.6% | 46.5% |
| 5tgnA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 48.0 | 4.38e-01 | 85.4% | 93.6% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 48.0 | 4.24e-01 | 85.4% | 89.2% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 45.0 | 3.74e-01 | 79.3% | 63.8% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 50.0 | 4.14e-01 | 90.2% | 63.2% |
| 1inyA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.60 | 52.0 | 3.43e-01 | 100.0% | 43.8% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 51.0 | 4.33e-01 | 92.7% | 58.5% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.60 | 49.0 | 3.67e-01 | 87.8% | 82.1% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.59 | 44.0 | 3.45e-01 | 81.7% | 78.5% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 41.0 | 4.55e-01 | 84.1% | 95.2% |
| 5w0kA01 | 3.90.380.20 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II | 0.59 | 44.0 | 2.91e-01 | 79.3% | 24.3% |
| 5evhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 46.0 | 4.12e-01 | 87.8% | 81.0% |
| 3qktD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 43.0 | 2.87e-01 | 79.3% | 35.5% |
| 2gxfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 48.0 | 4.29e-01 | 92.7% | 94.9% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.57 | 50.0 | 3.44e-01 | 100.0% | 75.8% |
| 3p0lD00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 51.0 | 3.94e-01 | 100.0% | 91.4% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.53 | 39.0 | 3.41e-01 | 82.9% | 50.4% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.52 | 43.0 | 3.63e-01 | 92.7% | 63.9% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973700 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.88 | 75.0 | 7.12e-01 | 95.1% | 77.9% |
| 2549179 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.84 | 74.0 | 7.16e-01 | 93.9% | 98.9% |
| 1841030 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.83 | 75.0 | 6.88e-01 | 98.8% | 94.3% |
| 1841031 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.82 | 72.0 | 6.88e-01 | 93.9% | 93.5% |
| 4888729 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.80 | 69.0 | 6.34e-01 | 93.9% | 85.8% |
| 3923143 | 633.23.1.17 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA | 0.69 | 50.0 | 3.60e-01 | 76.8% | 30.4% |
| 4464658 | 274.1.1.59 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGG | 0.65 | 52.0 | 4.63e-01 | 87.8% | 61.4% |
| 3589805 | 243.8.1.0 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein | 0.65 | 47.0 | 4.57e-01 | 78.0% | 77.9% |
| 3393661 | 243.19.1.2 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › Chitin_bind_4 | 0.64 | 45.0 | 5.08e-01 | 80.5% | 98.3% |
| 3402405 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.64 | 44.0 | 4.98e-01 | 80.5% | 93.7% |
| 3408795 | 12.1.1.60 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Chitin_bind_4 | 0.64 | 44.0 | 5.02e-01 | 80.5% | 96.7% |
| 4854042 | 12.3.1.10 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › MdoG | 0.64 | 56.0 | 3.65e-01 | 98.8% | 33.3% |
| 144144 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.63 | 54.0 | 3.56e-01 | 100.0% | 43.1% |
| 3391001 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.62 | 45.0 | 3.35e-01 | 76.8% | 32.7% |
| 4998774 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.61 | 46.0 | 2.83e-01 | 79.3% | 25.8% |
| 5081617 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 46.0 | 2.97e-01 | 79.3% | 30.1% |
| 4984958 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.60 | 45.0 | 2.95e-01 | 79.3% | 30.9% |
| 3407647 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.60 | 45.0 | 4.89e-01 | 95.1% | 95.6% |
| 4956931 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.59 | 44.0 | 2.70e-01 | 79.3% | 21.0% |
| 5047049 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.59 | 44.0 | 2.61e-01 | 79.3% | 18.8% |
| 3510918 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 49.0 | 4.17e-01 | 92.7% | 58.5% |
| 4960428 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.58 | 43.0 | 3.06e-01 | 79.3% | 75.2% |
| 3729648 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.58 | 48.0 | 4.15e-01 | 92.7% | 84.6% |
| 1167757 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.58 | 43.0 | 3.55e-01 | 79.3% | 76.9% |
| 3802306 | 284.1.2.0 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases | 0.57 | 45.0 | 4.35e-01 | 96.3% | 74.7% |
| 3450553 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.54 | 44.0 | 3.71e-01 | 91.5% | 71.8% |
| 3907198 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.53 | 45.0 | 3.38e-01 | 93.9% | 79.0% |
| 5061086 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.53 | 41.0 | 3.20e-01 | 86.6% | 83.0% |
| 3318685 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.53 | 45.0 | 4.23e-01 | 96.3% | 75.2% |