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SRR1747035_scaffold_3_prodigal-single.1__X__X__00047
Bact-VirSRR1747035_scaffold_3_prodigal-single.1__X__X__00047
Identity
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 65-137
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cbyA00 | 3.40.198.10 | Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like | 0.65 | 47.0 | 3.31e-01 | 76.7% | 31.3% |
| 2wzfA01 | 1.10.1740.130 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.61 | 44.0 | 3.93e-01 | 75.3% | 60.6% |
| 2ao9I01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 31.0 | 2.94e-01 | 98.6% | 39.1% |
| 2j4bB00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.59 | 42.0 | 3.50e-01 | 75.3% | 95.5% |
| 2vx2G02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.57 | 37.0 | 4.09e-01 | 98.6% | 87.3% |
| 5zjgA02 | 1.10.246.130 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.57 | 47.0 | 4.18e-01 | 94.5% | 80.4% |
| 2kj9A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.57 | 43.0 | 3.72e-01 | 82.2% | 64.4% |
| 1z8sA02 | 6.10.140.360 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 33.0 | 3.92e-01 | 93.2% | 97.6% |
| 2yufA00 | 1.20.120.2010 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NAB conserved domain 2 | 0.56 | 45.0 | 3.68e-01 | 90.4% | 47.2% |
| 3rlfF01 | 1.20.58.370 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like | 0.56 | 41.0 | 3.95e-01 | 80.8% | 79.1% |
| 2lyyA00 | 1.10.287.3020 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 40.0 | 3.73e-01 | 98.6% | 66.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3297133 | 103.4.1.5 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 | 0.67 | 48.0 | 4.77e-01 | 75.3% | 89.3% |
| 5001687 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.63 | 43.0 | 4.60e-01 | 72.6% | 84.1% |
| 3789508 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.63 | 43.0 | 4.44e-01 | 71.2% | 87.1% |
| 5044339 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 45.0 | 4.10e-01 | 76.7% | 82.0% |
| 3408346 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.61 | 44.0 | 4.38e-01 | 97.3% | 74.7% |
| 4033044 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.61 | 45.0 | 4.53e-01 | 80.8% | 97.3% |
| 4033037 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.59 | 43.0 | 4.40e-01 | 76.7% | 100.0% |
| 4984969 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 45.0 | 3.17e-01 | 82.2% | 29.5% |
| 3686977 | 4320.1.1.1 ↗ | alpha superhelices › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › TFIID_NTD2 | 0.57 | 46.0 | 3.62e-01 | 89.0% | 93.5% |
| 4984411 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.53 | 47.0 | 3.10e-01 | 100.0% | 32.1% |