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SRR1747035_scaffold_3_prodigal-single.1__X__X__00059

Bact-Vir

SRR1747035_scaffold_3_prodigal-single.1__X__X__00059

Identity

Kingdom:
phage

Quality

66.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-75
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 49.0 4.63e-01 100.0% 55.6%
2iusA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 46.0 2.96e-01 79.1% 14.6%
3gwaA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.61 41.0 3.16e-01 71.6% 54.0%
1vbiA01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.53 38.0 3.43e-01 79.1% 87.4%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3870735 601.25.1.5 ↗ alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › OPA1_C 0.58 45.0 3.61e-01 82.1% 69.6%