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SRR1747035_scaffold_3_prodigal-single.1__X__X__00113
Bact-VirSRR1747035_scaffold_3_prodigal-single.1__X__X__00113
Identity
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-183
Domain cluster:
rep: IMGVR_UViG_2061766007_001514-2061766007-_HiSeq_18404380__D12-155_160-175
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13597.12 best | NRDD | 50.7 | 1.70e-13 | 100.0% | 27.0% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z41A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 53.0 | 4.22e-01 | 100.0% | 43.9% |
| 6y1xB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 47.0 | 4.18e-01 | 98.2% | 53.9% |
| 2xtkA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 46.0 | 3.81e-01 | 94.7% | 41.9% |
| 2j6vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.61 | 51.0 | 4.29e-01 | 100.0% | 53.6% |
| 4rz2B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 41.0 | 3.62e-01 | 100.0% | 44.9% |
| 4bj1A02 | 3.40.50.12060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 38.0 | 4.05e-01 | 91.7% | 70.3% |
| 1hjxA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 49.0 | 4.10e-01 | 100.0% | 49.8% |
| 3if5A02 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.59 | 30.0 | 4.00e-01 | 85.2% | 91.0% |
| 1zp6A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 41.0 | 4.10e-01 | 97.6% | 67.6% |
| 4p7oB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 53.0 | 4.23e-01 | 100.0% | 50.0% |
| 4a64C03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.58 | 34.0 | 4.22e-01 | 76.9% | 97.0% |
| 1rliD00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.57 | 40.0 | 4.03e-01 | 88.8% | 70.2% |
| 2bmjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 37.0 | 3.71e-01 | 98.2% | 62.1% |
| 3oa5B02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 52.0 | 4.02e-01 | 100.0% | 55.0% |
| 3nvaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 48.0 | 4.05e-01 | 91.1% | 64.9% |
| 3l2oB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 39.0 | 3.94e-01 | 97.6% | 68.0% |
| 4imrB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 47.0 | 4.10e-01 | 98.2% | 58.9% |
| 2aqwA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 3.82e-01 | 99.4% | 47.4% |
| 3t1iA02 | 3.30.110.110 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Mre11, capping domain | 0.56 | 31.0 | 3.95e-01 | 85.8% | 94.7% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 43.0 | 3.60e-01 | 98.2% | 47.5% |
| 4cz2B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 38.0 | 3.77e-01 | 98.8% | 64.8% |
| 3lufB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 35.0 | 3.99e-01 | 88.2% | 84.9% |
| 1e6cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 4.17e-01 | 91.1% | 78.2% |
| 6canA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 50.0 | 4.09e-01 | 99.4% | 71.2% |
| 5idqB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 4.08e-01 | 99.4% | 67.1% |
| 3v3tA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.54 | 45.0 | 4.26e-01 | 95.9% | 73.7% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 36.0 | 3.92e-01 | 85.2% | 82.6% |
| 1eswA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 48.0 | 3.43e-01 | 98.2% | 63.4% |
| 1zd9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 40.0 | 4.08e-01 | 100.0% | 80.7% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 34.0 | 3.74e-01 | 96.4% | 80.5% |
| 1t5fA00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.52 | 45.0 | 3.67e-01 | 92.3% | 57.0% |
| 5l8sA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 47.0 | 4.13e-01 | 100.0% | 82.5% |
| 2fwmX00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 4.28e-01 | 95.9% | 90.1% |
| 8ckpA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 46.0 | 3.94e-01 | 100.0% | 79.1% |
| 1hfvA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 38.0 | 3.94e-01 | 100.0% | 81.1% |
| 2q24A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 36.0 | 3.67e-01 | 73.4% | 87.3% |
| 3un1C00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 4.04e-01 | 95.9% | 70.5% |
| 2pz0B00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.50 | 45.0 | 3.99e-01 | 97.6% | 69.1% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1347962 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.96 | 94.0 | 7.22e-01 | 100.0% | 51.4% |
| 5031517 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.83 | 77.0 | 5.17e-01 | 100.0% | 29.0% |
| 5012376 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.83 | 77.0 | 5.14e-01 | 100.0% | 28.2% |
| 3978395 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.74 | 71.0 | 4.66e-01 | 100.0% | 27.9% |
| 3949156 | 2500.1.1.7 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Gly_radical, NRDD | 0.74 | 71.0 | 4.66e-01 | 100.0% | 27.9% |
| 4895332 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.74 | 70.0 | 4.86e-01 | 100.0% | 33.6% |
| 3245213 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 35.0 | 4.40e-01 | 91.7% | 84.6% |
| 5069487 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.64 | 41.0 | 4.38e-01 | 98.8% | 71.3% |
| 3818002 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.64 | 32.0 | 3.88e-01 | 71.6% | 71.8% |
| 3498778 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.61 | 39.0 | 4.42e-01 | 94.1% | 84.8% |
| 5050528 | 7601.1.1.2 ↗ | a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 | 0.59 | 39.0 | 3.10e-01 | 99.4% | 32.6% |
| 5077711 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.58 | 50.0 | 4.18e-01 | 98.2% | 55.0% |
| 3260634 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.57 | 44.0 | 4.06e-01 | 95.3% | 64.3% |
| 3500954 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.56 | 34.0 | 3.45e-01 | 98.8% | 59.8% |
| 3700114 | 2002.1.1.192 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase | 0.56 | 51.0 | 3.55e-01 | 100.0% | 34.3% |
| 4946227 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.56 | 42.0 | 4.22e-01 | 100.0% | 76.0% |
| 3929653 | 2002.1.1.32 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Oxidored_FMN | 0.56 | 51.0 | 3.78e-01 | 100.0% | 60.8% |
| 5051742 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.55 | 50.0 | 4.11e-01 | 100.0% | 88.6% |
| 5017979 | 2007.2.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 | 0.55 | 37.0 | 3.72e-01 | 95.9% | 65.7% |
| 3511061 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.55 | 33.0 | 3.43e-01 | 98.8% | 60.6% |
| 4031847 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.55 | 49.0 | 4.11e-01 | 100.0% | 87.2% |
| 3263185 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 37.0 | 3.76e-01 | 98.8% | 68.8% |
| 4073364 | 2005.1.1.38 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTU2 | 0.53 | 40.0 | 3.28e-01 | 76.9% | 47.1% |
| 3855523 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.53 | 36.0 | 3.48e-01 | 100.0% | 59.5% |
| 4024446 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.53 | 46.0 | 3.89e-01 | 93.5% | 69.8% |
| 4975222 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.53 | 45.0 | 4.28e-01 | 91.7% | 78.5% |
| 4446404 | 2003.1.6.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 | 0.52 | 45.0 | 3.78e-01 | 91.7% | 78.1% |
| 4297793 | 7579.1.1.34 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Tannase | 0.52 | 46.0 | 3.39e-01 | 100.0% | 71.8% |
| 3565366 | 109.4.1.465 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPO22 | 0.52 | 34.0 | 3.45e-01 | 82.8% | 65.3% |
| 4475341 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.51 | 46.0 | 3.66e-01 | 100.0% | 83.3% |
| 4019866 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.51 | 46.0 | 3.72e-01 | 100.0% | 74.0% |
| 3781507 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.51 | 46.0 | 3.75e-01 | 99.4% | 92.5% |
| 2511302 | 2003.1.1.61 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR | 0.51 | 42.0 | 4.34e-01 | 95.3% | 92.0% |
| 5051100 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 46.0 | 3.98e-01 | 100.0% | 66.8% |
| 3274328 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.50 | 45.0 | 3.27e-01 | 98.8% | 51.7% |
| 4559367 | 7574.1.1.8 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transket_pyr | 0.50 | 41.0 | 4.00e-01 | 91.1% | 77.4% |
D2
high
residues 217-291
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13597.12 best | NRDD | 37.1 | 2.40e-09 | 100.0% | 15.4% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t1iA02 | 3.30.110.110 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Mre11, capping domain | 0.75 | 59.0 | 5.44e-01 | 98.7% | 66.3% |
| 3g5cA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.68 | 46.0 | 3.35e-01 | 100.0% | 25.6% |
| 3abfA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.67 | 40.0 | 4.29e-01 | 98.7% | 68.8% |
| 4fdxB00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.66 | 39.0 | 4.14e-01 | 97.3% | 67.2% |
| 3m21F00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.66 | 42.0 | 4.36e-01 | 100.0% | 71.6% |
| 3ej7H00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.65 | 39.0 | 4.45e-01 | 100.0% | 83.3% |
| 2fm7A00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.65 | 38.0 | 4.14e-01 | 97.3% | 69.4% |
| 2wkbA01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.65 | 38.0 | 3.52e-01 | 98.7% | 44.3% |
| 6ogmD00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.64 | 38.0 | 4.08e-01 | 97.3% | 70.5% |
| 1mwwB00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.63 | 40.0 | 3.48e-01 | 100.0% | 40.7% |
| 3mb2B00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.63 | 37.0 | 4.07e-01 | 93.3% | 72.9% |
| 3ej3C00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.63 | 37.0 | 3.95e-01 | 97.3% | 67.2% |
| 3n54B03 | 3.30.300.210 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Nutrient germinant receptor protein C, domain 3 | 0.63 | 56.0 | 4.55e-01 | 100.0% | 62.9% |
| 3fdxA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.62 | 38.0 | 3.20e-01 | 98.7% | 36.2% |
| 2bdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 44.0 | 3.36e-01 | 100.0% | 35.1% |
| 1u2mA00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.56 | 49.0 | 4.67e-01 | 97.3% | 83.7% |
| 3g85A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 32.0 | 2.73e-01 | 98.7% | 33.3% |
| 8dv0A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 47.0 | 3.54e-01 | 100.0% | 75.3% |
| 4dcuA03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 30.0 | 3.01e-01 | 96.0% | 50.0% |
| 3a4lB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 41.0 | 3.15e-01 | 90.7% | 97.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5031517 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.93 | 89.0 | 5.11e-01 | 100.0% | 14.2% |
| 5037576 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.93 | 88.0 | 5.21e-01 | 100.0% | 17.1% |
| 4942624 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.92 | 87.0 | 5.25e-01 | 100.0% | 19.6% |
| 4987959 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.90 | 83.0 | 4.87e-01 | 100.0% | 14.4% |
| 3793982 | 2498.1.1.4 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Reprolysin | 0.67 | 54.0 | 3.70e-01 | 100.0% | 25.4% |
| 3996083 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 52.0 | 3.69e-01 | 98.7% | 33.2% |
| 3218210 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.56 | 46.0 | 3.17e-01 | 92.0% | 27.1% |
| 4975539 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 44.0 | 3.42e-01 | 90.7% | 61.8% |