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SRR1747035_scaffold_3_prodigal-single.1__X__X__00263
Bact-VirSRR1747035_scaffold_3_prodigal-single.1__X__X__00263
Identity
- Kingdom:
- phage
Quality
72.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-91
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.66 | 41.0 | 4.82e-01 | 78.0% | 98.2% |
| 1okjB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 45.0 | 3.98e-01 | 76.9% | 66.9% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.59 | 36.0 | 3.37e-01 | 84.6% | 49.6% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.59 | 36.0 | 3.29e-01 | 84.6% | 46.3% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.58 | 37.0 | 3.35e-01 | 84.6% | 48.3% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.58 | 46.0 | 4.18e-01 | 86.8% | 76.0% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 34.0 | 3.19e-01 | 81.3% | 48.7% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 35.0 | 3.16e-01 | 84.6% | 46.0% |
| 4a2bA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 45.0 | 4.44e-01 | 87.9% | 93.7% |
| 2yt4A03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 37.0 | 3.60e-01 | 78.0% | 61.5% |
| 2hf6A00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 41.0 | 3.48e-01 | 80.2% | 61.7% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 27.0 | 3.47e-01 | 81.3% | 93.3% |
| 2qa1A02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 34.0 | 3.60e-01 | 91.2% | 74.7% |
| 5b7gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.52 | 39.0 | 2.92e-01 | 81.3% | 87.1% |
| 1w63Q00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 40.0 | 3.41e-01 | 83.5% | 58.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3334492 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.76 | 53.0 | 5.63e-01 | 73.6% | 81.2% |
| 3979711 | 252.2.1.6 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_2 | 0.63 | 40.0 | 4.58e-01 | 71.4% | 89.2% |
| 3514659 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 39.0 | 3.83e-01 | 82.4% | 64.0% |
| 3343488 | 223.2.1.8 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin | 0.56 | 38.0 | 3.21e-01 | 73.6% | 42.0% |
| 3728783 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.55 | 39.0 | 3.39e-01 | 73.6% | 72.1% |
| 3479661 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 35.0 | 3.37e-01 | 89.0% | 55.5% |
| 3549045 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.54 | 38.0 | 3.66e-01 | 76.9% | 62.7% |
| 3364335 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.54 | 42.0 | 3.40e-01 | 82.4% | 53.3% |
| 3783241 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.54 | 41.0 | 3.47e-01 | 80.2% | 60.7% |
| 3886048 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.54 | 42.0 | 3.47e-01 | 82.4% | 57.1% |
| 3739595 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.53 | 40.0 | 3.48e-01 | 80.2% | 61.4% |
| 3882038 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.53 | 41.0 | 3.41e-01 | 82.4% | 56.8% |
| 3647236 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 41.0 | 3.13e-01 | 82.4% | 38.5% |
| 3711364 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.53 | 40.0 | 3.36e-01 | 80.2% | 58.0% |
| 3657096 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.52 | 42.0 | 3.43e-01 | 85.7% | 55.2% |
| 3782075 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.52 | 40.0 | 3.32e-01 | 80.2% | 61.9% |
| 3514660 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 38.0 | 3.86e-01 | 87.9% | 78.9% |
| 3605690 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.52 | 39.0 | 3.22e-01 | 78.0% | 58.7% |
| 3325173 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 40.0 | 3.33e-01 | 82.4% | 55.0% |
| 3201557 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 39.0 | 3.00e-01 | 80.2% | 46.2% |
| 4068244 | 2484.1.1.49 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N | 0.52 | 42.0 | 3.66e-01 | 92.3% | 70.0% |
| 3476370 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 38.0 | 3.24e-01 | 76.9% | 60.0% |
| 3698977 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.52 | 39.0 | 3.17e-01 | 80.2% | 53.5% |
| 4027768 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 39.0 | 3.47e-01 | 82.4% | 68.9% |
| 3797523 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 37.0 | 3.34e-01 | 78.0% | 55.4% |
| 3349559 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 37.0 | 3.33e-01 | 76.9% | 62.4% |
| 3742622 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 39.0 | 3.34e-01 | 82.4% | 60.0% |
| 5076118 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 38.0 | 3.25e-01 | 80.2% | 60.7% |
| 3741860 | 223.2.1.7 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N | 0.50 | 38.0 | 3.37e-01 | 80.2% | 63.1% |