←Back to structures
SRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00042
Bact-VirSRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00042
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 57-222
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 61.5 | 1.10e-16 | 58.4% | 70.1% |
| PF13306.13 | LRR_5 | 42.4 | 8.60e-11 | 44.6% | 55.9% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.83 | 79.0 | 5.77e-01 | 100.0% | 43.7% |
| 4fd0A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.82 | 78.0 | 6.19e-01 | 100.0% | 60.3% |
| 4h09D00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.80 | 73.0 | 5.44e-01 | 95.2% | 44.3% |
| 4fs7A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.78 | 75.0 | 5.52e-01 | 100.0% | 44.4% |
| 4gt6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.77 | 73.0 | 5.44e-01 | 100.0% | 44.6% |
| 4ojuA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.74 | 56.0 | 6.09e-01 | 78.3% | 96.5% |
| 1oznA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.73 | 68.0 | 5.65e-01 | 100.0% | 71.8% |
| 5z8xA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.72 | 67.0 | 5.27e-01 | 100.0% | 63.7% |
| 4rcaB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 65.0 | 5.70e-01 | 100.0% | 85.5% |
| 3sb4A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.69 | 59.0 | 5.78e-01 | 89.8% | 98.3% |
| 4bsrB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.69 | 63.0 | 4.58e-01 | 100.0% | 39.6% |
| 1h6uA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 57.0 | 5.85e-01 | 98.2% | 92.6% |
| 2r9uA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.68 | 57.0 | 5.63e-01 | 94.0% | 85.1% |
| 2wfhA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.67 | 58.0 | 5.66e-01 | 92.8% | 91.2% |
| 4xsqB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 53.0 | 5.21e-01 | 83.7% | 96.1% |
| 2xotB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 61.0 | 5.33e-01 | 100.0% | 76.9% |
| 1ogqA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 59.0 | 4.79e-01 | 100.0% | 51.4% |
| 4ezgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 60.0 | 5.78e-01 | 98.2% | 94.1% |
| 2id5A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.65 | 60.0 | 4.63e-01 | 100.0% | 56.5% |
| 1o6vB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 59.0 | 4.51e-01 | 100.0% | 54.4% |
| 2eklA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 33.0 | 3.84e-01 | 75.9% | 83.5% |
| 6biiA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 35.0 | 3.75e-01 | 86.7% | 82.0% |
| 6pexA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 35.0 | 3.98e-01 | 75.9% | 93.0% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1295939 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.80 | 73.0 | 5.44e-01 | 95.2% | 44.3% |
| 3504259 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.79 | 75.0 | 5.66e-01 | 100.0% | 58.4% |
| 3931506 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.79 | 74.0 | 5.75e-01 | 100.0% | 61.8% |
| 3217369 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.79 | 74.0 | 5.56e-01 | 100.0% | 48.5% |
| 1281087 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.78 | 75.0 | 5.52e-01 | 100.0% | 44.4% |
| 1297113 | 207.1.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5 | 0.73 | 56.0 | 6.09e-01 | 78.9% | 96.5% |
| 3995585 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.73 | 69.0 | 6.24e-01 | 100.0% | 84.7% |
| 3414286 | 207.1.1.139 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_6, LRR_8 | 0.73 | 68.0 | 4.13e-01 | 100.0% | 22.7% |
| 4579952 | 207.1.1.237 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8, LRR_14 | 0.72 | 67.0 | 4.75e-01 | 100.0% | 42.7% |
| 4830812 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.71 | 62.0 | 6.11e-01 | 92.8% | 93.2% |
| 3501488 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.71 | 66.0 | 4.57e-01 | 100.0% | 35.6% |
| 3932543 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.71 | 65.0 | 4.46e-01 | 100.0% | 34.0% |
| 3432778 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.71 | 58.0 | 5.84e-01 | 87.3% | 100.0% |
| 3914290 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.71 | 66.0 | 4.41e-01 | 100.0% | 33.8% |
| 1255240 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.70 | 66.0 | 4.90e-01 | 100.0% | 54.1% |
| 3565124 | 207.1.1.141 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 | 0.70 | 65.0 | 4.38e-01 | 100.0% | 34.0% |
| 3309439 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.70 | 65.0 | 5.46e-01 | 100.0% | 80.4% |
| 3257440 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.70 | 61.0 | 4.69e-01 | 100.0% | 41.4% |
| 1599332 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 65.0 | 5.26e-01 | 100.0% | 62.5% |
| 2325379 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.70 | 65.0 | 4.72e-01 | 100.0% | 48.3% |
| 3456751 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 65.0 | 5.12e-01 | 100.0% | 55.8% |
| 3259024 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.69 | 59.0 | 4.76e-01 | 100.0% | 48.3% |
| 4473760 | 207.1.1.187 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4, LRR_8, LRR_9 | 0.69 | 64.0 | 5.38e-01 | 100.0% | 61.9% |
| 3563572 | 207.1.1.176 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_5, LRR_8 | 0.69 | 64.0 | 4.69e-01 | 100.0% | 47.4% |
| 3261470 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.69 | 63.0 | 4.40e-01 | 100.0% | 32.1% |
| 3901019 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.68 | 63.0 | 4.66e-01 | 100.0% | 46.8% |
| 3461421 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 55.0 | 5.53e-01 | 83.7% | 100.0% |
| 3208534 | 207.1.1.82 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Ecm33 | 0.68 | 63.0 | 4.91e-01 | 100.0% | 61.4% |
| 3257223 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.68 | 58.0 | 4.45e-01 | 97.6% | 40.6% |
| 3256702 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.67 | 59.0 | 4.25e-01 | 100.0% | 32.6% |
| 3863110 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.67 | 62.0 | 4.89e-01 | 100.0% | 59.9% |
| 3261583 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.67 | 62.0 | 4.18e-01 | 100.0% | 28.3% |
| 3272560 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.67 | 61.0 | 4.38e-01 | 100.0% | 42.7% |
| 1338388 | 207.1.1.206 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8, LRR_9 | 0.67 | 59.0 | 5.70e-01 | 100.0% | 85.0% |
| 3612194 | 207.1.1.146 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4, LRR_6, LRR_9 | 0.67 | 61.0 | 5.48e-01 | 100.0% | 74.8% |
| 3254906 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.67 | 60.0 | 4.09e-01 | 100.0% | 27.4% |
| 1489204 | 207.1.1.234 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8, LRR_EndoS | 0.67 | 59.0 | 5.79e-01 | 100.0% | 89.3% |
| 5051061 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.67 | 59.0 | 5.31e-01 | 95.2% | 86.7% |
| 3783901 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 59.0 | 4.46e-01 | 97.6% | 43.7% |
| 3264277 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.66 | 60.0 | 4.22e-01 | 100.0% | 38.3% |
| 3454086 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.66 | 61.0 | 4.29e-01 | 100.0% | 41.4% |
| 3655821 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.66 | 60.0 | 5.26e-01 | 100.0% | 79.6% |
| 3779005 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 60.0 | 4.16e-01 | 100.0% | 29.7% |
| 5049312 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.66 | 60.0 | 5.16e-01 | 100.0% | 62.7% |
| 1607411 | 207.1.1.137 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8 | 0.66 | 60.0 | 4.96e-01 | 100.0% | 64.8% |
| 3705958 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.65 | 60.0 | 4.95e-01 | 100.0% | 64.7% |
| None | — | 0.65 | 47.0 | 5.21e-01 | 97.0% | 93.8% | |
| 1789392 | 207.1.1.50 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4,LRR_6 | 0.65 | 59.0 | 4.38e-01 | 100.0% | 41.2% |
| 3714910 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 60.0 | 4.43e-01 | 100.0% | 44.8% |
| 3645056 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.65 | 55.0 | 5.56e-01 | 92.2% | 89.9% |
| 3250590 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.65 | 59.0 | 5.13e-01 | 100.0% | 66.3% |
| 3611380 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.64 | 59.0 | 4.82e-01 | 100.0% | 62.6% |
| 3258873 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.64 | 58.0 | 4.94e-01 | 100.0% | 60.1% |
| 3755434 | 207.1.1.208 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_8, LRR_9 | 0.64 | 59.0 | 3.76e-01 | 100.0% | 21.5% |
| 3749693 | 207.1.1.144 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4 | 0.64 | 55.0 | 5.31e-01 | 100.0% | 80.5% |
| 3264689 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.64 | 58.0 | 3.91e-01 | 100.0% | 35.2% |
| 1030871 | 207.1.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4 | 0.64 | 58.0 | 5.65e-01 | 100.0% | 91.9% |
| 3820274 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.63 | 58.0 | 4.56e-01 | 100.0% | 54.5% |
| 3936229 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.61 | 54.0 | 4.12e-01 | 94.6% | 53.9% |
| 3260167 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.60 | 54.0 | 4.23e-01 | 100.0% | 45.4% |
| 3940679 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 52.0 | 3.79e-01 | 94.0% | 47.9% |
| 3597444 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 54.0 | 4.75e-01 | 100.0% | 68.4% |
| 3169236 | 207.1.1.422 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF30064, PF30065 | 0.59 | 51.0 | 3.91e-01 | 92.8% | 50.4% |
| 3940436 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.59 | 54.0 | 4.73e-01 | 100.0% | 84.9% |
| 3178076 | 207.1.1.47 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_6 | 0.59 | 54.0 | 4.47e-01 | 100.0% | 65.9% |
| 3931590 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.58 | 53.0 | 4.67e-01 | 100.0% | 89.8% |
| 3938490 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.57 | 52.0 | 4.81e-01 | 100.0% | 90.2% |
| 5031513 | 2003.1.11.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh | 0.53 | 32.0 | 3.77e-01 | 75.3% | 84.3% |
D2
medium
residues 1-56
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.70 | 52.0 | 4.23e-01 | 85.7% | 42.2% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 5.27e-01 | 92.9% | 89.8% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 4.70e-01 | 94.6% | 80.2% |
| 1oc2A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.62 | 44.0 | 4.04e-01 | 89.3% | 55.8% |
| 3egcD02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 51.0 | 3.95e-01 | 100.0% | 41.9% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 43.0 | 4.60e-01 | 83.9% | 91.7% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 44.0 | 4.24e-01 | 85.7% | 77.3% |
| 1vquA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.57 | 44.0 | 4.31e-01 | 92.9% | 88.1% |
| 1dgnA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.57 | 39.0 | 3.39e-01 | 71.4% | 75.3% |
| 4muoA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.57 | 43.0 | 4.10e-01 | 89.3% | 83.3% |
| 4dcmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 49.0 | 3.52e-01 | 100.0% | 46.6% |
| 1gv2A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 41.0 | 4.34e-01 | 82.1% | 100.0% |
| 2h56A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.55 | 42.0 | 3.46e-01 | 85.7% | 91.2% |
| 1qd1B02 | 3.30.70.670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain | 0.54 | 44.0 | 3.40e-01 | 100.0% | 67.6% |
| 3gwqA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.52 | 41.0 | 2.81e-01 | 92.9% | 50.6% |
| 4hojA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 43.0 | 3.67e-01 | 100.0% | 60.2% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.52 | 38.0 | 3.22e-01 | 78.6% | 48.4% |
| 3bh1A02 | 1.20.1570.10 | Mainly Alpha › Up-down Bundle › dip2346 fold › dip2346 domain like | 0.52 | 41.0 | 3.52e-01 | 94.6% | 79.2% |
| 2knjA00 | 1.10.150.440 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.50 | 38.0 | 3.39e-01 | 87.5% | 72.2% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3887965 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.66 | 53.0 | 5.35e-01 | 89.3% | 100.0% |
| 3878549 | 101.1.2.536 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 | 0.66 | 52.0 | 5.32e-01 | 89.3% | 100.0% |
| 3948842 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 54.0 | 5.51e-01 | 94.6% | 100.0% |
| 4236554 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.65 | 50.0 | 4.93e-01 | 85.7% | 91.7% |
| 4938071 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 46.0 | 4.92e-01 | 76.8% | 95.6% |
| 4945040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 55.0 | 5.46e-01 | 98.2% | 95.0% |
| 3287649 | 4033.1.1.1 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N | 0.63 | 50.0 | 4.06e-01 | 89.3% | 54.5% |
| 3229130 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.62 | 46.0 | 4.78e-01 | 85.7% | 96.0% |
| 5003129 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.61 | 49.0 | 4.76e-01 | 92.9% | 89.2% |
| 3901880 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 50.0 | 4.83e-01 | 94.6% | 86.2% |
| 5041057 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.21e-01 | 92.9% | 69.5% |
| 5049604 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 44.0 | 4.51e-01 | 80.4% | 87.3% |
| 4936197 | 101.1.1.62 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 | 0.60 | 46.0 | 4.65e-01 | 87.5% | 93.1% |
| 4991762 | 101.1.2.643 ↗ | alpha arrays › HTH › HTH › winged helix domain › AAA_assoc_C | 0.60 | 48.0 | 4.45e-01 | 92.9% | 76.0% |
| 3486574 | 101.1.1.50 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Nop16 | 0.59 | 42.0 | 4.17e-01 | 76.8% | 80.0% |
| 3413975 | 101.1.1.50 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Nop16 | 0.58 | 41.0 | 4.07e-01 | 75.0% | 76.7% |
| 4999090 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 47.0 | 3.61e-01 | 91.1% | 58.5% |
| 5031443 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 45.0 | 4.28e-01 | 91.1% | 94.3% |
| 4978415 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 47.0 | 3.00e-01 | 94.6% | 56.8% |
| 3287002 | 4033.1.1.1 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N | 0.57 | 48.0 | 3.79e-01 | 100.0% | 76.9% |
| 3716227 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 4.20e-01 | 96.4% | 73.8% |
| None | — | 0.56 | 43.0 | 2.92e-01 | 85.7% | 76.9% | |
| 3945810 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.51 | 38.0 | 3.29e-01 | 85.7% | 67.0% |