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SRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00101
Bact-VirSRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00101
Identity
- Kingdom:
- phage
Quality
50.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-126
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ubfA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.61 | 40.0 | 4.31e-01 | 86.4% | 77.4% |
| 2kywA00 | 3.10.20.320 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) | 0.59 | 37.0 | 4.26e-01 | 92.8% | 90.8% |
| 6vg1A06 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.57 | 39.0 | 4.34e-01 | 86.4% | 87.1% |
| 3rfzB04 | 2.60.40.2610 | Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein FimD, plug domain | 0.54 | 36.0 | 4.10e-01 | 87.2% | 94.5% |
| 3l6pA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 37.0 | 4.02e-01 | 74.4% | 90.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3917147 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 39.0 | 4.24e-01 | 91.2% | 76.0% |
| 3476055 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.56 | 43.0 | 3.82e-01 | 89.6% | 57.2% |
| 3619681 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 34.0 | 3.96e-01 | 91.2% | 87.1% |
| 4200814 | 11.1.4.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Usher | 0.54 | 36.0 | 4.20e-01 | 86.4% | 98.8% |
| 3996465 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.52 | 43.0 | 2.73e-01 | 89.6% | 69.1% |
| 5051004 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 37.0 | 4.16e-01 | 84.8% | 97.9% |
| 4948500 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.50 | 44.0 | 3.23e-01 | 95.2% | 81.6% |
D2
high
residues 158-250
D3
high
residues 279-370