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SRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00198
Bact-VirSRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00198
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-140
Domain cluster:
rep: IMGVR_UViG_3300002219_000010-3300002219-SCADCLC_1000083292__D4-110
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dp9A01 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.74 | 52.0 | 6.03e-01 | 83.3% | 100.0% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.70 | 54.0 | 5.11e-01 | 81.2% | 79.8% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.68 | 62.0 | 6.23e-01 | 100.0% | 96.4% |
| 1s04A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.66 | 50.0 | 5.51e-01 | 78.3% | 99.1% |
| 2hd9A00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.61 | 55.0 | 5.45e-01 | 100.0% | 92.4% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 42.0 | 4.38e-01 | 80.4% | 82.4% |
| 1zboA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.57 | 42.0 | 4.61e-01 | 100.0% | 93.8% |
| 3f7eA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 42.0 | 4.39e-01 | 80.4% | 84.4% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 42.0 | 4.33e-01 | 81.2% | 82.6% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 42.0 | 4.48e-01 | 82.6% | 94.9% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 39.0 | 4.15e-01 | 81.2% | 84.7% |
| 2htiA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 39.0 | 4.06e-01 | 81.2% | 81.7% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 41.0 | 4.02e-01 | 81.2% | 75.5% |
| 3dfjA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 32.0 | 3.48e-01 | 77.5% | 71.7% |
| 2uv8A06 | 3.30.70.2490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 23.0 | 3.17e-01 | 71.0% | 80.6% |
| 2hlcA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 31.0 | 3.52e-01 | 78.3% | 78.8% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 39.0 | 3.93e-01 | 81.2% | 86.6% |
| 5fcrC02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 31.0 | 3.43e-01 | 79.0% | 76.6% |
| 6mv4H02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 31.0 | 3.46e-01 | 78.3% | 76.9% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4229723 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.80 | 67.0 | 6.52e-01 | 99.3% | 80.7% |
| 4122172 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 65.0 | 6.87e-01 | 99.3% | 98.4% |
| 4940231 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.78 | 66.0 | 6.76e-01 | 100.0% | 93.2% |
| 5032181 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 70.0 | 6.99e-01 | 100.0% | 96.4% |
| 5016521 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.75 | 66.0 | 6.66e-01 | 100.0% | 94.8% |
| 5079450 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.75 | 66.0 | 6.64e-01 | 100.0% | 92.9% |
| 2105336 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.75 | 66.0 | 6.42e-01 | 100.0% | 86.6% |
| 5014837 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.74 | 70.0 | 6.40e-01 | 100.0% | 93.7% |
| 5073325 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.74 | 67.0 | 6.70e-01 | 100.0% | 93.6% |
| 4995643 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.73 | 67.0 | 6.66e-01 | 100.0% | 93.1% |
| 4957730 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.73 | 63.0 | 6.31e-01 | 100.0% | 90.0% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.73 | 56.0 | 6.18e-01 | 92.0% | 100.0% |
| 4970789 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.72 | 64.0 | 6.37e-01 | 100.0% | 92.1% |
| 5030320 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.72 | 59.0 | 6.16e-01 | 100.0% | 95.2% |
| 4940359 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 67.0 | 6.05e-01 | 100.0% | 85.0% |
| 5077279 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.71 | 53.0 | 5.71e-01 | 81.2% | 89.2% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 56.0 | 6.07e-01 | 86.2% | 99.1% |
| 4960614 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.70 | 54.0 | 5.98e-01 | 82.6% | 100.0% |
| 3934702 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.70 | 59.0 | 5.93e-01 | 100.0% | 89.3% |
| 4999514 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 64.0 | 6.25e-01 | 100.0% | 97.3% |
| 3894869 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 64.0 | 6.18e-01 | 100.0% | 93.5% |
| 4995779 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 52.0 | 5.07e-01 | 77.5% | 98.6% |
| 5023730 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.69 | 60.0 | 5.98e-01 | 97.8% | 91.0% |
| 3252646 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 59.0 | 5.94e-01 | 100.0% | 90.7% |
| 4950776 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.68 | 62.0 | 6.18e-01 | 98.6% | 96.4% |
| 3972039 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 55.0 | 5.65e-01 | 100.0% | 92.6% |
| 4954659 | 1.1.9.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 | 0.64 | 59.0 | 5.57e-01 | 100.0% | 87.9% |
| 3619452 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 58.0 | 5.58e-01 | 100.0% | 90.3% |
| 3220176 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 57.0 | 5.53e-01 | 100.0% | 90.7% |
| 4998591 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.62 | 57.0 | 5.61e-01 | 98.6% | 97.2% |
| 4967879 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.62 | 41.0 | 4.88e-01 | 77.5% | 97.9% |
| 4959440 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.59 | 46.0 | 4.27e-01 | 80.4% | 80.6% |
| 5012972 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 54.0 | 4.45e-01 | 100.0% | 79.9% |
| 4589682 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.58 | 44.0 | 4.20e-01 | 79.7% | 84.4% |
| 4949945 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.55 | 42.0 | 4.35e-01 | 82.6% | 86.9% |
| 5021621 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.53 | 41.0 | 4.15e-01 | 82.6% | 83.0% |
| 3452899 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 37.0 | 3.04e-01 | 75.4% | 74.9% |
| 4989918 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 40.0 | 4.33e-01 | 99.3% | 99.1% |
| 4984219 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.51 | 42.0 | 2.98e-01 | 99.3% | 29.3% |
| 3947204 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.50 | 38.0 | 3.94e-01 | 98.6% | 85.4% |
| 3386975 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 38.0 | 4.15e-01 | 98.6% | 98.3% |
| 3566769 | 2003.1.5.44 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MT-A70 | 0.50 | 31.0 | 2.42e-01 | 76.1% | 29.2% |