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SRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00208
Bact-VirSRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00208
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-166
Domain cluster:
rep: KJ746502.1__AID18371.1__PPF1_58__00058__D3-160
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dp9A01 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.85 | 52.0 | 6.59e-01 | 77.6% | 100.0% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.83 | 39.0 | 5.70e-01 | 73.3% | 96.2% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.73 | 57.0 | 6.24e-01 | 100.0% | 97.1% |
| 3m6wA03 | 2.30.130.60 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.69 | 28.0 | 4.36e-01 | 75.2% | 94.0% |
| 1xneA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.68 | 44.0 | 5.30e-01 | 73.9% | 95.6% |
| 1te7A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.63 | 39.0 | 4.87e-01 | 73.3% | 99.0% |
| 2qeaB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 39.0 | 4.00e-01 | 76.4% | 65.4% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 38.0 | 4.26e-01 | 76.4% | 79.2% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 39.0 | 4.23e-01 | 76.4% | 74.6% |
| 1flmA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 38.0 | 4.35e-01 | 76.4% | 83.6% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 39.0 | 4.32e-01 | 76.4% | 81.1% |
| 2htiA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 37.0 | 4.16e-01 | 76.4% | 80.2% |
| 1v47A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.58 | 43.0 | 4.82e-01 | 76.4% | 98.5% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 39.0 | 4.11e-01 | 76.4% | 74.2% |
| 3ba3B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 38.0 | 4.10e-01 | 75.8% | 77.6% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 37.0 | 3.92e-01 | 76.4% | 71.8% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 39.0 | 4.16e-01 | 76.4% | 80.4% |
| 1jhdA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.55 | 41.0 | 3.92e-01 | 76.4% | 71.5% |
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 38.0 | 3.86e-01 | 75.8% | 70.2% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 39.0 | 4.24e-01 | 78.8% | 90.4% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 36.0 | 3.91e-01 | 76.4% | 82.4% |
| 1xhnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 3.92e-01 | 76.4% | 77.7% |
| 3n71A01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.52 | 25.0 | 3.16e-01 | 76.4% | 76.3% |
| 4x28C02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.51 | 32.0 | 3.82e-01 | 94.5% | 100.0% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940231 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.90 | 65.0 | 7.27e-01 | 100.0% | 91.0% |
| 4122172 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.90 | 66.0 | 7.58e-01 | 100.0% | 99.2% |
| 5016521 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.89 | 66.0 | 7.35e-01 | 100.0% | 92.6% |
| 4229723 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.89 | 65.0 | 6.88e-01 | 99.4% | 82.0% |
| 4995643 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.86 | 67.0 | 7.14e-01 | 100.0% | 91.0% |
| 5030320 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.84 | 59.0 | 6.79e-01 | 99.4% | 94.4% |
| 5079450 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.84 | 63.0 | 6.87e-01 | 100.0% | 90.7% |
| 373012 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.83 | 39.0 | 5.69e-01 | 73.3% | 95.0% |
| 2105336 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.82 | 64.0 | 6.72e-01 | 100.0% | 87.9% |
| 178 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.81 | 55.0 | 6.35e-01 | 98.8% | 93.3% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.81 | 53.0 | 6.41e-01 | 92.1% | 99.1% |
| 4970789 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.80 | 61.0 | 6.64e-01 | 100.0% | 92.1% |
| 5023730 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.80 | 61.0 | 6.55e-01 | 97.6% | 89.7% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 50.0 | 6.07e-01 | 72.7% | 94.5% |
| 3934702 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 57.0 | 6.20e-01 | 100.0% | 87.1% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 54.0 | 6.41e-01 | 80.0% | 99.1% |
| 3208149 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 56.0 | 6.30e-01 | 100.0% | 92.3% |
| 5016524 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 58.0 | 6.19e-01 | 100.0% | 86.2% |
| 5077279 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.78 | 50.0 | 5.91e-01 | 75.8% | 89.2% |
| 4928024 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 53.0 | 5.96e-01 | 100.0% | 88.3% |
| 4013185 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 57.0 | 6.04e-01 | 100.0% | 82.7% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 49.0 | 6.14e-01 | 73.9% | 100.0% |
| 5059457 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 59.0 | 6.66e-01 | 100.0% | 99.2% |
| 4180783 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.77 | 40.0 | 5.36e-01 | 75.2% | 92.2% |
| 5032181 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.77 | 61.0 | 6.59e-01 | 99.4% | 96.4% |
| 3199787 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.77 | 56.0 | 6.18e-01 | 100.0% | 91.9% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.76 | 50.0 | 6.13e-01 | 76.4% | 100.0% |
| 4932847 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 53.0 | 6.07e-01 | 100.0% | 93.6% |
| 3165125 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 48.0 | 5.86e-01 | 73.9% | 98.1% |
| 4155252 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.76 | 47.0 | 5.84e-01 | 73.9% | 98.1% |
| 5081834 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 59.0 | 6.47e-01 | 100.0% | 97.0% |
| 4950776 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.76 | 61.0 | 6.57e-01 | 99.4% | 97.1% |
| 5070577 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.75 | 49.0 | 5.98e-01 | 73.3% | 99.1% |
| 4972117 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.75 | 51.0 | 5.90e-01 | 76.4% | 94.2% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.75 | 52.0 | 5.94e-01 | 80.0% | 93.6% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.74 | 51.0 | 6.08e-01 | 77.6% | 100.0% |
| 5014837 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.73 | 69.0 | 6.77e-01 | 100.0% | 93.7% |
| 5024536 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.73 | 58.0 | 6.16e-01 | 100.0% | 93.1% |
| 4632972 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.73 | 32.0 | 4.85e-01 | 73.3% | 100.0% |
| 4960614 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 47.0 | 5.68e-01 | 87.3% | 98.2% |
| 3972039 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 53.0 | 5.80e-01 | 100.0% | 91.1% |
| 3894869 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.72 | 61.0 | 6.26e-01 | 100.0% | 93.5% |
| 184578 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.72 | 55.0 | 5.76e-01 | 100.0% | 85.7% |
| 3598242 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 55.0 | 5.82e-01 | 100.0% | 89.7% |
| 3220176 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 56.0 | 5.87e-01 | 100.0% | 89.3% |
| 4991249 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 53.0 | 5.61e-01 | 100.0% | 86.2% |
| 4014658 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 48.0 | 5.55e-01 | 100.0% | 93.3% |
| 4954659 | 1.1.9.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 | 0.71 | 59.0 | 5.99e-01 | 100.0% | 87.9% |
| 3619452 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 57.0 | 5.90e-01 | 100.0% | 89.0% |
| 3252646 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.70 | 52.0 | 5.59e-01 | 100.0% | 89.3% |
| 4953076 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 49.0 | 5.64e-01 | 78.8% | 98.3% |
| 3954347 | 1.1.9.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 | 0.69 | 61.0 | 5.91e-01 | 100.0% | 85.0% |
| 4929736 | 1.1.9.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 | 0.69 | 61.0 | 6.05e-01 | 99.4% | 88.6% |
| 4999514 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 58.0 | 6.06e-01 | 100.0% | 97.3% |
| 3375062 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.68 | 55.0 | 5.63e-01 | 100.0% | 86.9% |
| 1037154 | 1.1.5.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_oxidase_2 | 0.58 | 39.0 | 4.06e-01 | 76.4% | 71.8% |
| 331530 | 1.1.5.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx_2 | 0.57 | 38.0 | 4.09e-01 | 75.8% | 77.1% |
| 4926888 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.57 | 38.0 | 4.16e-01 | 75.8% | 83.1% |
| 4331393 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.57 | 37.0 | 4.03e-01 | 76.4% | 77.1% |
| 3199622 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 43.0 | 4.53e-01 | 78.8% | 90.3% |
| 3280574 | 1.1.5.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red | 0.55 | 35.0 | 3.74e-01 | 75.2% | 72.9% |
| 5047697 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 36.0 | 4.07e-01 | 97.0% | 94.4% |
| 4946578 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.50 | 35.0 | 4.09e-01 | 98.2% | 99.2% |
| 5003606 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.50 | 36.0 | 3.38e-01 | 72.7% | 82.6% |