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SRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00233

Bact-Vir

SRR1747040_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00233

Identity

Kingdom:
phage

Quality

81.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-105_121-137
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ypxA00 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.52 42.0 3.09e-01 87.4% 55.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2067093 186.2.1.1 alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box 0.54 35.0 3.28e-01 80.2% 51.8%
4056789 4198.1.1.2 alpha arrays › TerB-like › TerB-like › TerB-like › ThylakoidFormat 0.51 41.0 3.44e-01 88.3% 73.5%
3661088 2003.1.4.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain 0.50 37.0 3.03e-01 78.4% 59.1%
D2 medium residues 144-204
PDB
Domain cluster: representative