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SRR1747043_scaffold_13_prodigal-single.1__X__X__00062

Bact-Vir

SRR1747043_scaffold_13_prodigal-single.1__X__X__00062

Identity

Kingdom:
phage

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-60
PDB
Domain cluster: representative
CATH (88)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cnwA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.81 59.0 4.27e-01 78.4% 32.6%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 62.0 6.47e-01 100.0% 93.5%
2a5hA03 6.20.120.40 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.77 42.0 3.95e-01 80.4% 45.2%
2haxA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 50.0 5.33e-01 78.4% 79.1%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.77 66.0 5.04e-01 100.0% 46.8%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 68.0 6.76e-01 100.0% 98.1%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 58.0 4.93e-01 100.0% 51.8%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 67.0 6.36e-01 100.0% 84.7%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 63.0 5.80e-01 100.0% 72.7%
2kcmA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 52.0 4.66e-01 76.5% 89.2%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.74 64.0 4.78e-01 100.0% 38.9%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.73 58.0 5.91e-01 100.0% 90.0%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.73 59.0 6.13e-01 100.0% 93.8%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 65.0 5.58e-01 100.0% 71.2%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.73 64.0 5.60e-01 100.0% 88.2%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.73 67.0 4.79e-01 100.0% 61.7%
3aqqA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 58.0 4.66e-01 90.2% 68.7%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.24e-01 100.0% 66.7%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 63.0 5.68e-01 100.0% 73.5%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 6.25e-01 100.0% 100.0%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.70 57.0 5.53e-01 100.0% 80.7%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 63.0 5.92e-01 100.0% 82.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 57.0 5.08e-01 100.0% 63.0%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 55.0 4.31e-01 90.2% 80.7%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 62.0 5.95e-01 100.0% 93.0%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 5.53e-01 98.0% 86.8%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 60.0 5.76e-01 100.0% 95.0%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 59.0 5.45e-01 100.0% 92.5%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 53.0 4.69e-01 88.2% 58.9%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 5.45e-01 84.3% 89.6%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 59.0 5.52e-01 100.0% 79.4%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 58.0 5.29e-01 94.1% 92.5%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 52.0 4.69e-01 88.2% 87.8%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.47e-01 100.0% 83.9%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.35e-01 94.1% 79.7%
2j5uA03 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.67 50.0 4.37e-01 82.4% 98.8%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.35e-01 100.0% 80.6%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 58.0 5.25e-01 100.0% 84.3%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 58.0 5.19e-01 100.0% 80.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 58.0 5.68e-01 100.0% 92.6%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 56.0 4.79e-01 94.1% 82.5%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 5.40e-01 100.0% 78.5%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.65 45.0 4.84e-01 72.5% 97.4%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.65 48.0 3.17e-01 82.4% 86.8%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 52.0 4.59e-01 88.2% 98.6%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 55.0 4.88e-01 100.0% 73.1%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 56.0 4.57e-01 98.0% 96.8%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 5.29e-01 100.0% 89.1%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.64 54.0 4.70e-01 100.0% 71.1%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.76e-01 100.0% 68.7%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.64 39.0 3.55e-01 80.4% 41.7%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.64 52.0 3.57e-01 100.0% 47.1%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 4.80e-01 100.0% 70.1%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.63 55.0 5.06e-01 98.0% 77.3%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.62 44.0 4.44e-01 76.5% 100.0%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 52.0 3.37e-01 96.1% 51.7%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 52.0 3.97e-01 94.1% 80.7%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 55.0 4.95e-01 98.0% 88.6%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 52.0 4.47e-01 100.0% 80.5%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 54.0 4.97e-01 100.0% 86.4%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 49.0 4.61e-01 92.2% 74.2%
3gd6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 52.0 3.86e-01 98.0% 94.4%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 4.65e-01 94.1% 69.9%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 52.0 3.90e-01 98.0% 94.7%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.61 48.0 4.20e-01 94.1% 85.4%
3h8lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 55.0 3.63e-01 100.0% 50.2%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 4.53e-01 100.0% 86.3%
2qf4A02 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.61 46.0 3.95e-01 88.2% 87.9%
3e8tA00 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.60 49.0 3.35e-01 98.0% 92.1%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.59 47.0 3.98e-01 94.1% 89.7%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 48.0 3.45e-01 96.1% 42.9%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 48.0 2.94e-01 96.1% 39.2%
5nahA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 52.0 3.15e-01 100.0% 41.7%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 48.0 3.35e-01 96.1% 61.0%
5x68A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 51.0 3.07e-01 100.0% 42.2%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 3.70e-01 98.0% 96.6%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 3.43e-01 98.0% 79.5%
4a2lF02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.01e-01 100.0% 86.8%
2bwnB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 46.0 3.24e-01 94.1% 64.2%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 3.64e-01 96.1% 60.2%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 3.61e-01 98.0% 96.5%
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 41.0 4.03e-01 86.3% 100.0%
2x8nA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.55 43.0 3.61e-01 90.2% 72.2%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.55e-01 94.1% 78.6%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 45.0 3.85e-01 100.0% 57.1%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.53 36.0 3.68e-01 88.2% 70.6%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.53 44.0 3.12e-01 94.1% 58.3%
4k7zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 44.0 2.97e-01 100.0% 61.2%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1031172 4.1.1.113 ↗ beta barrels › SH3 › SH3 › SH3 › TraI_2B 0.87 79.0 7.01e-01 100.0% 72.2%
3447770 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.87 57.0 6.60e-01 70.6% 100.0%
3300074 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 71.0 7.01e-01 100.0% 88.9%
3511278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 67.0 6.01e-01 100.0% 67.1%
3342430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 72.0 6.22e-01 100.0% 66.7%
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.80 73.0 6.44e-01 98.0% 77.1%
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.80 70.0 6.17e-01 100.0% 68.0%
3421158 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 72.0 6.78e-01 100.0% 83.3%
3834303 109.4.1.257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.79 71.0 4.06e-01 100.0% 11.0%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.79 70.0 6.16e-01 100.0% 69.3%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.79 67.0 5.92e-01 100.0% 65.3%
3847592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 70.0 3.99e-01 96.1% 11.1%
3368254 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.79 71.0 6.90e-01 100.0% 90.9%
3676844 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 69.0 6.03e-01 100.0% 66.7%
2641775 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.78 71.0 5.10e-01 100.0% 42.5%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 66.0 6.48e-01 100.0% 85.5%
3926118 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.77 69.0 6.55e-01 98.0% 88.3%
1144780 219.1.1.69 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GtgE 0.77 66.0 5.04e-01 100.0% 46.8%
3303889 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.77 68.0 5.96e-01 100.0% 66.7%
3450200 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 68.0 5.71e-01 100.0% 58.8%
3423337 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.77 67.0 5.78e-01 100.0% 62.5%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.77 68.0 6.30e-01 100.0% 87.7%
3866038 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.77 64.0 5.31e-01 98.0% 54.1%
3834390 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 65.0 6.56e-01 94.1% 94.0%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 68.0 6.27e-01 100.0% 87.7%
3818428 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.76 67.0 5.88e-01 100.0% 66.7%
3173941 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 65.0 5.16e-01 100.0% 48.0%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 66.0 4.91e-01 100.0% 40.0%
3329059 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.76 65.0 6.58e-01 96.1% 96.0%
3824346 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 67.0 5.71e-01 100.0% 62.5%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.76 65.0 5.93e-01 100.0% 72.3%
3301383 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.76 60.0 6.12e-01 88.2% 90.0%
2126408 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.76 68.0 5.79e-01 100.0% 64.2%
3357400 9.1.1.34 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PAP_fibrillin 0.76 56.0 4.25e-01 80.4% 53.3%
3737903 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.75 62.0 6.04e-01 88.2% 81.8%
5065570 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.75 66.0 5.62e-01 100.0% 77.6%
3476478 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 64.0 5.13e-01 100.0% 49.5%
3363360 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.75 63.0 5.31e-01 100.0% 56.5%
4213135 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.75 68.0 5.02e-01 100.0% 46.0%
3409299 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.75 69.0 5.79e-01 100.0% 62.5%
2427475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 64.0 5.82e-01 100.0% 71.6%
3707634 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 6.37e-01 100.0% 87.3%
3609527 2006.1.1.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF 0.75 60.0 3.87e-01 96.1% 21.0%
4028871 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.74 61.0 5.42e-01 90.2% 86.3%
4978411 219.1.1.153 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N 0.74 65.0 4.45e-01 100.0% 39.4%
3917568 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 65.0 4.89e-01 100.0% 42.6%
3764432 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 62.0 5.70e-01 100.0% 72.3%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 62.0 6.11e-01 100.0% 87.3%
3504417 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 63.0 5.12e-01 100.0% 53.3%
3475240 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.73 61.0 6.02e-01 94.1% 89.1%
3397845 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 66.0 5.15e-01 100.0% 60.0%
4470603 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.72 64.0 4.34e-01 100.0% 29.7%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 63.0 6.21e-01 100.0% 89.1%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.72 66.0 4.27e-01 100.0% 25.7%
4015427 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 62.0 4.00e-01 98.0% 22.3%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 66.0 6.20e-01 100.0% 88.3%
4409502 1.1.5.26 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN 0.72 58.0 4.53e-01 90.2% 81.8%
2127246 4.8.1.4 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MBT 0.71 65.0 5.81e-01 100.0% 76.8%
3372243 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 61.0 5.31e-01 100.0% 62.5%
4026282 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 64.0 5.19e-01 100.0% 55.6%
3885049 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.71 61.0 6.02e-01 100.0% 89.1%
3022070 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 64.0 4.87e-01 100.0% 69.3%
3533770 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.70 64.0 4.98e-01 100.0% 49.5%
3936885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.57e-01 94.1% 73.8%
3558188 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.70 64.0 5.55e-01 100.0% 72.0%
4268386 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.52e-01 100.0% 71.4%
858452 4.1.1.476 ↗ beta barrels › SH3 › SH3 › SH3 › PF30873 0.69 59.0 4.79e-01 100.0% 51.0%
3901117 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.69 61.0 4.16e-01 100.0% 31.7%
5000741 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.69 57.0 5.30e-01 100.0% 73.8%
3719595 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.72e-01 100.0% 88.3%
3251940 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.68 61.0 5.33e-01 100.0% 69.3%
3484007 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.44e-01 100.0% 81.4%
3940729 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.04e-01 100.0% 62.4%
3243188 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 61.0 5.32e-01 100.0% 84.0%
3898952 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 60.0 5.24e-01 100.0% 76.0%
5028741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.63e-01 100.0% 89.1%
4940710 3174.2.1.0 ↗ beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA 0.67 59.0 5.49e-01 100.0% 90.8%
3485745 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 59.0 5.59e-01 100.0% 95.0%
3395150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 59.0 5.64e-01 100.0% 85.0%
3475807 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 59.0 5.05e-01 100.0% 87.5%
3407855 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 56.0 4.65e-01 100.0% 54.4%
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 59.0 5.43e-01 100.0% 82.8%
4432457 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 56.0 5.12e-01 100.0% 72.9%
3979552 219.1.1.90 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF1287 0.65 55.0 3.86e-01 100.0% 29.7%
3531894 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 56.0 5.22e-01 100.0% 96.9%
4001172 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 56.0 5.07e-01 100.0% 82.9%
3852545 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 57.0 5.37e-01 100.0% 83.3%
3406663 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 51.0 5.20e-01 88.2% 100.0%
3529708 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 56.0 4.95e-01 100.0% 77.3%
3593222 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 4.71e-01 100.0% 62.2%
4680114 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 53.0 4.77e-01 100.0% 76.0%
3227009 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.62 54.0 4.78e-01 98.0% 70.7%
4929323 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 48.0 3.96e-01 100.0% 78.2%
4944045 4.17.1.2 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.59 50.0 4.58e-01 100.0% 72.9%
3924469 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 42.0 2.80e-01 82.4% 50.9%
5077602 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.51 43.0 2.77e-01 98.0% 43.3%
D2 high residues 64-212
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.56 33.0 3.67e-01 72.5% 73.9%
3rlfF03 2.40.430.10 Mainly Beta › Beta Barrel › Periplasmic binding protein-like II › D-maltodextrin-binding protein, MBP 0.56 31.0 3.83e-01 96.0% 88.6%
6hxiA01 3.30.470.110 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.54 29.0 2.70e-01 93.3% 36.7%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 32.0 3.58e-01 77.9% 75.7%
2xu8A00 3.90.70.190 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) 0.50 29.0 3.27e-01 97.3% 72.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4485741 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.59 29.0 1.88e-01 100.0% 9.8%
5045707 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 22.0 2.99e-01 100.0% 72.0%
4153293 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.50 33.0 3.65e-01 100.0% 83.3%
D3 high residues 215-286
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pb9A00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.62 50.0 3.78e-01 90.3% 78.8%
2phpA00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.62 49.0 3.76e-01 90.3% 73.5%
5jcvA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.56 48.0 3.70e-01 100.0% 61.1%
4d70A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.56 48.0 3.81e-01 100.0% 49.4%
3fn5B00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.56 46.0 3.73e-01 100.0% 52.8%
5go5A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.54 45.0 3.68e-01 100.0% 55.3%
2hjiA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 44.0 3.56e-01 98.6% 76.9%
1u0mA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 41.0 3.44e-01 91.7% 90.4%
4am6A02 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.53 37.0 3.02e-01 76.4% 87.1%
1tedA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 42.0 3.46e-01 94.4% 91.3%
7ry6A01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.52 42.0 3.43e-01 94.4% 67.3%
2hfzA01 3.30.70.2840 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Flavivirus RNA-directed RNA polymerase, thumb domain 0.52 42.0 3.95e-01 88.9% 77.5%
3mdyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 43.0 3.86e-01 98.6% 80.9%
3fk5A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 41.0 3.48e-01 94.4% 91.4%
6iouA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 41.0 3.74e-01 97.2% 96.4%
3vs8H00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 40.0 2.67e-01 93.1% 87.2%
3lidA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 40.0 3.40e-01 93.1% 91.8%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5024134 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.59 51.0 4.17e-01 100.0% 56.4%
4975939 2003.1.5.54 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 0.58 51.0 3.49e-01 100.0% 98.0%
4945567 2003.1.5.54 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 0.58 48.0 3.41e-01 100.0% 100.0%
3223743 228.1.1.2 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › DUF5352 0.57 49.0 4.75e-01 98.6% 89.2%
428579 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.56 48.0 3.99e-01 100.0% 55.5%
4344990 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.56 47.0 4.33e-01 100.0% 80.0%
4861416 5.1.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 0.55 44.0 2.93e-01 93.1% 30.5%
4232452 223.1.1.5 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA 0.54 40.0 3.27e-01 83.3% 73.5%
5000427 4246.1.1.0 ↗ a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit 0.52 40.0 2.65e-01 87.5% 19.1%
3592819 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.51 40.0 3.38e-01 100.0% 50.8%