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SRR1747043_scaffold_24_prodigal-single.1__X__X__00093
Bact-VirSRR1747043_scaffold_24_prodigal-single.1__X__X__00093
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-157
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eu8A00 | 1.50.10.140 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Glycoside hydrolase 144 (GH144) | 0.60 | 51.0 | 3.56e-01 | 90.5% | 90.5% |
| 5dlqB01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 53.0 | 3.77e-01 | 100.0% | 47.1% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.57 | 47.0 | 4.55e-01 | 87.6% | 95.5% |
| 3k8pC02 | 1.10.357.150 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.57 | 41.0 | 3.74e-01 | 75.2% | 71.6% |
| 5bz1A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 51.0 | 3.76e-01 | 100.0% | 55.3% |
| 1zu2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 42.0 | 4.07e-01 | 78.1% | 70.9% |
| 3gs3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 51.0 | 4.21e-01 | 100.0% | 80.7% |
| 1sgmA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 45.0 | 4.13e-01 | 86.1% | 94.6% |
| 7cc7A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 46.0 | 3.99e-01 | 91.2% | 67.9% |
| 3ut4A00 | 1.25.40.750 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Domain of unknown function DUF5071 | 0.54 | 43.0 | 4.46e-01 | 99.3% | 91.4% |
| 4abnA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 44.0 | 3.55e-01 | 89.8% | 50.2% |
| 2vvwA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.54 | 37.0 | 3.68e-01 | 76.6% | 65.3% |
| 3feyA02 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 48.0 | 4.29e-01 | 100.0% | 78.1% |
| 5djsA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 43.0 | 4.28e-01 | 92.0% | 86.0% |
| 3nxcA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 40.0 | 3.76e-01 | 83.9% | 91.5% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 44.0 | 4.21e-01 | 97.1% | 90.5% |
| 4fjqA02 | 1.50.10.130 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain | 0.51 | 38.0 | 3.63e-01 | 81.8% | 67.3% |
| 3zheB02 | 1.20.190.60 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.50 | 45.0 | 4.15e-01 | 100.0% | 96.7% |
| 2ijqA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.50 | 36.0 | 3.62e-01 | 84.7% | 71.0% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3186425 | 109.4.1.140 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20 | 0.67 | 49.0 | 4.66e-01 | 77.4% | 72.1% |
| 3461200 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 53.0 | 4.98e-01 | 96.4% | 71.2% |
| 3705075 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 55.0 | 3.42e-01 | 94.9% | 20.5% |
| 3536981 | 109.4.1.2403 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, NatA_aux_su, TPR_8, PF31234 | 0.62 | 46.0 | 2.84e-01 | 77.4% | 13.5% |
| 3518267 | 109.4.1.1638 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N, XMAP215_CLASP_TOG | 0.61 | 55.0 | 3.19e-01 | 100.0% | 13.2% |
| 3445445 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 46.0 | 4.36e-01 | 92.7% | 68.1% |
| 3414171 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.60 | 49.0 | 4.49e-01 | 87.6% | 71.7% |
| 3791727 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 52.0 | 4.31e-01 | 99.3% | 96.0% |
| 3936543 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 52.0 | 4.39e-01 | 99.3% | 65.1% |
| 4832835 | 109.4.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm | 0.58 | 51.0 | 4.86e-01 | 99.3% | 97.0% |
| 3511211 | 109.4.1.509 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRP12_HEAT | 0.58 | 53.0 | 3.46e-01 | 99.3% | 38.8% |
| 3731150 | 109.4.1.98 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 43.0 | 4.68e-01 | 78.1% | 95.7% |
| 3939402 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 51.0 | 3.64e-01 | 98.5% | 87.1% |
| 4061824 | 109.4.1.266 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › XMAP215_CLASP_TOG | 0.58 | 53.0 | 2.98e-01 | 100.0% | 12.6% |
| 3772039 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 52.0 | 4.58e-01 | 100.0% | 85.0% |
| 3707516 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 51.0 | 3.70e-01 | 99.3% | 95.4% |
| 3786280 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.57 | 46.0 | 4.73e-01 | 99.3% | 93.1% |
| 3873723 | 109.4.1.894 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_CUL7_CUL9 | 0.57 | 51.0 | 3.58e-01 | 99.3% | 32.3% |
| 4017860 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.56 | 50.0 | 3.38e-01 | 97.8% | 51.2% |
| 4018805 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.56 | 50.0 | 3.43e-01 | 100.0% | 52.2% |
| 3607987 | 109.4.1.2243 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29386 | 0.54 | 47.0 | 3.96e-01 | 93.4% | 80.0% |
| 4026145 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 48.0 | 3.96e-01 | 100.0% | 81.1% |
| 3255882 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 47.0 | 3.75e-01 | 100.0% | 47.8% |
| 3739261 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 48.0 | 3.74e-01 | 100.0% | 48.5% |
| 3866264 | 109.4.1.2027 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_EMC2 | 0.53 | 41.0 | 3.95e-01 | 100.0% | 72.9% |
| 3734420 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 45.0 | 3.08e-01 | 92.7% | 39.4% |
| 3654538 | 109.4.1.631 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP72 | 0.52 | 42.0 | 3.27e-01 | 100.0% | 39.0% |
| 3802375 | 109.4.1.1275 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 | 0.52 | 43.0 | 2.64e-01 | 100.0% | 13.8% |
| 4527327 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 45.0 | 4.18e-01 | 100.0% | 96.6% |
| 4012335 | 3924.1.1.1 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2 | 0.50 | 38.0 | 3.40e-01 | 78.1% | 88.4% |
D2
medium
residues 158-268
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4exjA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 52.0 | 5.11e-01 | 83.8% | 86.8% |
| 3m3mA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 53.0 | 5.25e-01 | 87.4% | 91.4% |
| 1za0A00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.65 | 58.0 | 4.51e-01 | 99.1% | 95.0% |
| 2x64A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 51.0 | 5.09e-01 | 83.8% | 89.4% |
| 4nn1A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 48.0 | 3.95e-01 | 79.3% | 72.2% |
| 5ux2B01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 54.0 | 4.47e-01 | 95.5% | 83.6% |
| 4ks9A01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.64 | 56.0 | 5.38e-01 | 95.5% | 100.0% |
| 1vdyA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 52.0 | 4.82e-01 | 88.3% | 81.4% |
| 1te4A01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.61 | 40.0 | 4.43e-01 | 91.9% | 83.1% |
| 3mzvA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.60 | 42.0 | 3.03e-01 | 72.1% | 37.9% |
| 3t33A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.59 | 50.0 | 3.40e-01 | 92.8% | 33.4% |
| 3nb2A02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.58 | 47.0 | 4.24e-01 | 88.3% | 67.7% |
| 3rmqA02 | 6.10.140.1650 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 29.0 | 3.82e-01 | 73.0% | 96.4% |
| 1hssA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.56 | 45.0 | 4.53e-01 | 87.4% | 95.5% |
| 5e7pA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 42.0 | 3.69e-01 | 82.0% | 85.5% |
| 3s5rB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 42.0 | 3.50e-01 | 81.1% | 79.1% |
| 7zdtD01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.53 | 41.0 | 2.97e-01 | 82.0% | 92.3% |
| 2lvfA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.53 | 42.0 | 4.19e-01 | 83.8% | 86.0% |
| 3fflA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 42.0 | 4.07e-01 | 96.4% | 77.0% |
| 3tp3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 37.0 | 3.40e-01 | 76.6% | 82.4% |
| 4j8sA00 | 1.25.40.840 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain | 0.51 | 44.0 | 3.83e-01 | 100.0% | 69.4% |
| 1urvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 44.0 | 4.00e-01 | 99.1% | 87.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4053979 | 109.4.1.891 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_HEATR1 | 0.70 | 63.0 | 4.05e-01 | 100.0% | 36.4% |
| 4649904 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.67 | 53.0 | 5.50e-01 | 85.6% | 94.3% |
| 3583099 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 54.0 | 4.26e-01 | 89.2% | 49.1% |
| 3346911 | 109.4.1.94 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANTH | 0.64 | 53.0 | 4.57e-01 | 89.2% | 68.6% |
| 3185102 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.64 | 52.0 | 4.90e-01 | 88.3% | 88.1% |
| 3248894 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 51.0 | 4.56e-01 | 98.2% | 60.6% |
| 3634487 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 56.0 | 4.33e-01 | 100.0% | 49.2% |
| 3585392 | 109.4.1.310 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HDS,Sec7-like_HUS,DCB,BIG2_C | 0.61 | 54.0 | 3.06e-01 | 100.0% | 25.8% |
| 3640483 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 49.0 | 3.87e-01 | 88.3% | 98.3% |
| 4261469 | 185.1.1.6 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl, Gliadin | 0.59 | 45.0 | 4.78e-01 | 82.0% | 100.0% |
| 4610814 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.59 | 47.0 | 4.68e-01 | 85.6% | 85.2% |
| 3919069 | 176.1.1.2 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin_2 | 0.59 | 45.0 | 4.61e-01 | 84.7% | 83.8% |
| 3258661 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.58 | 43.0 | 3.54e-01 | 77.5% | 73.7% |
| 4951802 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.57 | 42.0 | 3.61e-01 | 75.7% | 75.6% |
| 3272128 | 109.6.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF_N | 0.55 | 45.0 | 4.16e-01 | 91.9% | 72.0% |
| 3485538 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 44.0 | 3.66e-01 | 92.8% | 74.4% |
| 5014987 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.53 | 39.0 | 3.01e-01 | 76.6% | 59.3% |
| 3211871 | 2008.1.1.31 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › VRR_NUC | 0.53 | 38.0 | 2.99e-01 | 75.7% | 50.6% |
| 4252582 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.52 | 46.0 | 4.18e-01 | 100.0% | 90.3% |
| 4633569 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.51 | 40.0 | 4.09e-01 | 86.5% | 94.5% |