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SRR1747044_scaffold_0_prodigal-single.1__X__X__00015

Bact-Vir

SRR1747044_scaffold_0_prodigal-single.1__X__X__00015

Identity

Kingdom:
phage

Quality

84.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-198
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02518.32 best HATPase_c 34.1 4.60e-08 82.7% 94.6%
PF13589.13 HATPase_c_3 30.4 5.00e-07 77.5% 72.3%
D2 high residues 226-343
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jqgA02 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 37.0 2.78e-01 72.9% 89.0%
1dgjA05 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.51 31.0 3.39e-01 94.9% 73.4%
2ozlB02 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 35.0 3.36e-01 70.3% 99.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5001215 212.1.1.3 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N 0.58 39.0 3.51e-01 97.5% 47.1%
3282393 212.1.1.1 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › HSP90 0.55 51.0 4.76e-01 100.0% 93.1%
4632895 212.1.1.9 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair 0.52 47.0 4.60e-01 99.2% 100.0%
3485548 2007.1.3.28 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.51 39.0 3.53e-01 83.9% 99.4%